Information for 5-SGAATTCCCG (Motif 12)

T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
Reverse Opposite:
A G T C A C T G A T C G C T A G T C G A C G T A A G C T A C G T A G T C A T C G
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.518
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif459.4
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets46.5 +/- 27.3bp
Average Position of motif in Background49.1 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:SGAATTCCCG-
-RCATTCCWGG
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:SGAATTCCCG-
-GCATTCCAGN
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G A C G T
A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:SGAATTCCCG-
-RCATTCCWGG
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G A C G T
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G

TEAD3/MA0808.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:SGAATTCCCG
-ACATTCCA-
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:SGAATTCCCG
CACATTCCAT
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:6
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:SGAATTCCCG----
----TTCCCGCCWG
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:SGAATTCCCG
GGAAANCCCC
 T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-SGAATTCCCG
GGAAATTCCC-
 A C G T T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---SGAATTCCCG
NGGGGATTTCCC-
 A C G T A C G T A C G T T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---SGAATTCCCG
GGGGGAATCCCC-
 A C G T A C G T A C G T T A G C T C A G T G C A T C G A G C A T A G C T G A T C T A G C T G A C T C A G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T