Information for 2-VVCAGCTGBNNNY (Motif 2)

T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
Reverse Opposite:
T C G A T A C G A G T C T A G C T G A C A G T C C G T A A T C G A T G C C G A T A C T G A T C G A T C G
p-value:1e-59
log p-value:-1.374e+02
Information Content per bp:1.597
Number of Target Sequences with motif314.0
Percentage of Target Sequences with motif37.79%
Number of Background Sequences with motif6991.8
Percentage of Background Sequences with motif14.65%
Average Position of motif in Targets52.3 +/- 24.4bp
Average Position of motif in Background50.3 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:VVCAGCTGBNNNY
-VCAGCTGBNN--
 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-VVCAGCTGBNNNY
NAACAGCTGT----
 A C G T T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:VVCAGCTGBNNNY
-GCAGCTGTNN--
 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--VVCAGCTGBNNNY
NNVVCAGCTGBN---
 A C G T A C G T T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-VVCAGCTGBNNNY
CAGCAGCTGN----
 A C G T T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.92
Offset:0
Orientation:forward strand
Alignment:VVCAGCTGBNNNY
GACAGCTGCAG--
 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-VVCAGCTGBNNNY
NAHCAGCTGD----
 A C G T T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:VVCAGCTGBNNNY
TGCAGCTGTCCCT
 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:VVCAGCTGBNNNY
-CCAGCTGTTN--
 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.91
Offset:0
Orientation:forward strand
Alignment:VVCAGCTGBNNNY
AACAGCTGCAG--
 T A G C T A G C A G T C C G T A A T C G A T G C A C G T A C T G A C T G A T C G T C A G A T C G A G C T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T