Information for 14-CTGGGCAAAAAGA (Motif 18)

A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C C G A T C G A T A G C T A C G T A C G T C A T G A T G C A G T C A G T C C T G A C T A G
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 13.5bp
Average Position of motif in Background58.6 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCAAAAAGA
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCAAAAAGA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGGGCAAAAAGA
---GGAACAAAGR
 A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCAAAAAGA
CSTGGGAAAD----
 A C G T A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGGCAAAAAGA
-WAAGTAAAYA--
 A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCAAAAAGA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCAAAAAGA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGGGCAAAAAGA
---VRRACAAWGG
 A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CTGGGCAAAAAGA
------ACAAAG-
 A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGGCAAAAAGA----
AGAAGAACAAAGGACTA
 A G T C A G C T A C T G C T A G A T C G G A T C C G T A G T C A C T G A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A