Homer de novo Motif Results (hs_ColonAdenocarcinoma_LoVo_undef_SOX4_SRX335199_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 892
Total background sequences = 46877
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G C G T A A T C G G A C T A T G C A T G C A T C G G T C A A T G C T C G A C T A G G T A C C A G T 1e-13-3.098e+011.12%0.02%27.6bp (19.2bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.568)
More Information | Similar Motifs Found
motif file (matrix)
2 T G C A A C G T A G T C A C G T A G T C A C G T A C G T A G T C C G T A G T C A C G T A C T G A C G T A A G T C C G T A C T G A 1e-13-3.038e+010.67%0.00%26.1bp (0.0bp)HOXC13/MA0907.1/Jaspar(0.550)
More Information | Similar Motifs Found
motif file (matrix)
3 A T G C G A T C C T A G A T G C T A G C G T C A G A C T A T G C G A C T A C G T T A C G G A T C A T C G 1e-13-3.030e+017.29%2.51%26.8bp (28.6bp)YY1(Zf)/Promoter/Homer(0.865)
More Information | Similar Motifs Found
motif file (matrix)
4 A C G T A C G T A C T G A C T G T G A C C G T A C T A G A T C G A G T C A C G T A G T C G T A C C G T A 1e-12-2.908e+011.23%0.04%24.5bp (21.1bp)NFIA/MA0670.1/Jaspar(0.744)
More Information | Similar Motifs Found
motif file (matrix)
5 A G C T C A T G C G A T G T A C A T G C A G C T A C T G C G T A A T C G A G T C A G T C A T G C A C T G A C T G A C T G C T G A 1e-12-2.864e+010.78%0.01%27.0bp (8.3bp)PB0057.1_Rxra_1/Jaspar(0.564)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C 1e-12-2.853e+011.46%0.08%28.0bp (27.6bp)PB0060.1_Smad3_1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
7 * G T A C A G T C A G C T G A C T A C G T A G T C A G T C A C T G A T G C A C G T 1e-10-2.531e+011.79%0.17%26.5bp (33.3bp)SPIB/MA0081.1/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G A T G T C A G T C A A C G T A C G T A C G T A G T C A G T C C A T G C A T G 1e-10-2.494e+011.68%0.15%18.3bp (29.6bp)Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.811)
More Information | Similar Motifs Found
motif file (matrix)
9 * C T A G C G T A A C T G A G T C A C G T A G T C A C G T C G T A A G T C G T C A G T A C A C T G C G T A 1e-10-2.462e+010.56%0.00%35.0bp (0.0bp)PB0099.1_Zfp691_1/Jaspar(0.562)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G C T A C T G T A G C C T A G A C T G T A G C A T C G C T A G C G T A C T A G A T G C C G T A A C T G A C T G A T C G A T G C 1e-10-2.462e+010.56%0.00%27.9bp (0.0bp)PB0199.1_Zfp161_2/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
11 * A T G C C G A T A C T G A G T C G T C A A T C G T A G C G A C T C G T A A C T G C T G A C G T A A C T G 1e-9-2.301e+011.12%0.06%22.8bp (22.1bp)POL008.1_DCE_S_I/Jaspar(0.540)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T G T A C A C G T A C G T A G T C C G T A A C T G A C T G C G T A A T C G G T A C A C G T A C G T 1e-9-2.117e+010.56%0.01%17.2bp (12.4bp)PH0068.1_Hoxc13/Jaspar(0.559)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A C T G C T G A A T C G A C T G C G T A A C T G C T A G A G T C A G T C A C T G A T C G A T G C 1e-8-2.033e+010.78%0.02%17.2bp (18.9bp)ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer(0.633)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G A G C T C G T A A T C G A C T G G T C A C T G A A C G T C G T A A C T G 1e-8-2.030e+011.01%0.05%16.2bp (22.3bp)Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer(0.629)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C C G A T C T G A A C T G A G T C G T C A A C G T C G A T A C G T C T G A 1e-8-1.947e+011.57%0.19%26.1bp (27.0bp)BARHL2/MA0635.1/Jaspar(0.711)
More Information | Similar Motifs Found
motif file (matrix)
16 * C T G A C T G A C T A G T C A G C G A T T C A G T G C A C T A G T C G A T C G A C T G A C T A G C G A T C T G A C G T A T A G C 1e-7-1.733e+010.67%0.02%23.6bp (22.3bp)TBR1/MA0802.1/Jaspar(0.661)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G A T C A G T C G A T C T G A C G T A C T G A G T C A G T C A C G T A T C G A T C G A G C T A C G A T 1e-7-1.639e+011.79%0.33%18.6bp (29.1bp)PB0182.1_Srf_2/Jaspar(0.875)
More Information | Similar Motifs Found
motif file (matrix)
18 * G T A C G A T C G T A C A G T C G A T C A G T C A G T C A G T C A G T C G T A C G T A C G T A C G T A C G T A C G T A C T G A C 1e-5-1.369e+010.34%0.00%20.3bp (8.9bp)PB0097.1_Zfp281_1/Jaspar(0.897)
More Information | Similar Motifs Found
motif file (matrix)