p-value: | 1e-12 |
log p-value: | -2.908e+01 |
Information Content per bp: | 1.817 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.23% |
Number of Background Sequences with motif | 19.1 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 40.4 +/- 24.5bp |
Average Position of motif in Background | 58.2 +/- 21.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFIA/MA0670.1/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTGGCAGGCTCCA NNTTGGCANN----- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTGGCAGGCTCCA TTGGCA------- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGGCAGGCTCCA NTTGGCANN----- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TTGGCAGGCTCCA CTTGGCAA------ |
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Hic1/MA0739.1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTGGCAGGCTCCA GGTTGGCAT------ |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTGGCAGGCTCCA TTGACAGC----- |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTGGCAGGCTCCA- CTGGCAGNCTGCCA |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTGGCAGGCTCCA- TTGGCATGGTGCCA |
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PKNOX2/MA0783.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTGGCAGGCTCCA -TGACAGGTGTCA |
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PKNOX1/MA0782.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTGGCAGGCTCCA -TGACAGGTGTCA |
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