Information for 4-TCAGGAACCAGAC (Motif 6)

A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C
Reverse Opposite:
A T C G A C G T A G T C G A C T A C T G T A C G C A G T G A C T A G T C A G T C C A G T A C T G G T C A
p-value:1e-12
log p-value:-2.853e+01
Information Content per bp:1.749
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.2 +/- 28.0bp
Average Position of motif in Background48.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCAGGAACCAGAC------
--CAAATCCAGACATCACA
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAGGAACCAGAC
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TCAGGAACCAGAC--
-------CCAGACAG
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:TCAGGAACCAGAC----
-------CCAGACRSVB
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCAGGAACCAGAC-
----ATGCCAGACN
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCAGGAACCAGAC
CAAATTCCGGAACC----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGGAACCAGAC-
--AGGAAACAGCTG
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TCAGGAACCAGAC--
-------BCAGACWA
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCAGGAACCAGAC
NACAGGAAAT----
 A C G T A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCAGGAACCAGAC--
--AGGTGNCAGACAG
 A C G T A G T C G C T A A C T G T C A G C G T A G T C A A G T C A G T C C G T A C T A G C G T A A T G C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G