Homer de novo Motif Results (hs_BoneOsteosarcoma_U2OS_undef_E2F1_SRX1036439_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 946
Total background sequences = 43132
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T A G C T A T G C A T G C T G A C C T A G G T A C A G T C G T C A C G A T 1e-104-2.407e+0222.94%3.63%24.0bp (38.2bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.950)
More Information | Similar Motifs Found
motif file (matrix)
2 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A 1e-24-5.755e+013.91%0.36%20.8bp (40.1bp)E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer(0.628)
More Information | Similar Motifs Found
motif file (matrix)
3 A T C G G C T A C G T A A C T G A C G T A T G C A T C G A C T G C T G A C T A G 1e-16-3.906e+015.18%1.15%28.2bp (35.0bp)POL008.1_DCE_S_I/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
4 A G C T T G C A G A T C T G C A G T C A G T A C C G A T A G T C A T G C T G A C 1e-16-3.835e+016.77%1.93%28.8bp (31.6bp)GFY(?)/Promoter/Homer(0.820)
More Information | Similar Motifs Found
motif file (matrix)
5 C G A T A G T C A G T C A C T G A G T C A G T C A G T C A G T C A T G C A C G T A C T G A G T C A G C T 1e-15-3.569e+010.85%0.01%23.9bp (13.6bp)PB0076.1_Sp4_1/Jaspar(0.776)
More Information | Similar Motifs Found
motif file (matrix)
6 G T A C C A T G T G A C C T A G G A T C A C T G G T A C C A T G A G T C C A T G A T G C C A T G T A G C 1e-15-3.530e+0117.34%8.98%22.8bp (41.6bp)PB0095.1_Zfp161_1/Jaspar(0.825)
More Information | Similar Motifs Found
motif file (matrix)
7 C A T G A T G C T C G A T C G A A G T C A G T C C T G A T C G A A C G T G T A C T G C A A T G C G C T A 1e-14-3.384e+015.50%1.47%25.7bp (35.3bp)POL004.1_CCAAT-box/Jaspar(0.800)
More Information | Similar Motifs Found
motif file (matrix)
8 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C 1e-14-3.270e+011.59%0.08%27.7bp (36.7bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.785)
More Information | Similar Motifs Found
motif file (matrix)
9 A T G C C G T A A C T G G T A C C G T A A T G C C G T A A C T G C G T A C G T A C G T A A G T C G T A C 1e-12-2.954e+010.63%0.00%22.2bp (9.6bp)PB0033.1_Irf3_1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
10 A G C T A G T C A C T G G T A C A G T C A T G C A C T G A G T C A T G C C G T A C G T A A C G T A T C G 1e-12-2.954e+010.63%0.00%19.6bp (1.6bp)E2F8/MA0865.1/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
11 A G C T A T G C A G C T A G T C A C T G A T G C A T C G C G T A T A C G T C G A A T G C A G C T G T C A 1e-12-2.914e+011.90%0.17%29.0bp (42.6bp)GFX(?)/Promoter/Homer(0.949)
More Information | Similar Motifs Found
motif file (matrix)
12 T C A G T A C G C G A T G A T C C G T A A G T C T C A G C G A T A T C G T C G A 1e-12-2.854e+014.33%1.10%27.1bp (40.2bp)E-box(bHLH)/Promoter/Homer(0.965)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T C T G A G A C T A G C T C A T G T C A G G A T C A G T C T G A C T C G A 1e-11-2.695e+015.07%1.54%29.8bp (35.7bp)NFY(CCAAT)/Promoter/Homer(0.736)
More Information | Similar Motifs Found
motif file (matrix)
14 * G T A C C T A G A C T G G T A C A G T C A G T C G T A C C T A G A G T C A G T C A G C T A G T C A G T C A G T C C A G T A T G C 1e-11-2.536e+011.06%0.04%30.3bp (24.6bp)SP2/MA0516.1/Jaspar(0.802)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C C G T A A G T C A G T C C G T A A T C G C T G A A C T G C T G A A C T G A G T C A C T G A G T C 1e-10-2.392e+010.53%0.00%23.8bp (0.0bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.736)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T C A A C T G A G T C A T G C C G T A C T A G A G C T A C T G G T C A A C T G A T G C C G T A A C T G A C T G G T C A C G T A 1e-10-2.392e+010.53%0.00%16.6bp (19.6bp)POL004.1_CCAAT-box/Jaspar(0.568)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G C T T G A C G C T A G A C T C G A T G A T C T A C G C T G A T C G A T G A C 1e-10-2.378e+012.43%0.42%28.9bp (33.5bp)PB0194.1_Zbtb12_2/Jaspar(0.732)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G C T A T C G C T G A A T G C A T C G A G C T G T A C G C T A C G A T T A C G 1e-9-2.260e+013.81%1.07%26.0bp (36.0bp)JDP2(var.2)/MA0656.1/Jaspar(0.940)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G G T A C G T A C A C T G A C G T C G T A C G T A C G T A A C T G A T G C 1e-9-2.221e+011.37%0.12%24.3bp (40.6bp)CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer(0.757)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A G C A T G C A T T C A G G A T C C A T G G T A C C A T G G T A C G A C T A C G T T C A G G A C T 1e-8-1.942e+019.94%5.23%25.7bp (38.2bp)PB0008.1_E2F2_1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G T A G C C T A G A T G C G C A T A T C G G C A T A C T G C G T A T C A G 1e-8-1.915e+013.70%1.16%25.0bp (31.5bp)POL009.1_DCE_S_II/Jaspar(0.772)
More Information | Similar Motifs Found
motif file (matrix)
22 * A T G C A T C G T A C G G T C A A G C T A G T C G T A C A G T C A G C T A T G C A G T C A G T C A C G T A C T G A T G C T A C G 1e-8-1.872e+010.74%0.03%13.9bp (10.1bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.608)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A 1e-8-1.843e+011.48%0.20%30.1bp (32.3bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.804)
More Information | Similar Motifs Found
motif file (matrix)
24 * C A T G G T A C A C T G C A T G A T C G A C T G G A T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T A T C G G T A C 1e-8-1.842e+010.85%0.04%24.2bp (18.0bp)PB0039.1_Klf7_1/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
25 * A T G C A T G C C G T A A C T G C T G A A C T G A G T C A C T G A G T C T A G C A C G T A C T G A G T C 1e-6-1.591e+010.95%0.08%27.6bp (42.0bp)NRF1/MA0506.1/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A A C T G A G T C A C T G A C G T A G T C C G T A A C T G A G T C A C T G C G T A A G T C A C T G 1e-6-1.573e+010.42%0.01%19.8bp (0.0bp)HINFP/MA0131.2/Jaspar(0.620)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G 1e-5-1.327e+010.32%0.00%24.3bp (0.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.578)
More Information | Similar Motifs Found
motif file (matrix)