Information for 20-CCAGGCCTTA (Motif 23)

A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
Reverse Opposite:
G C A T T G C A G T C A A C T G A C T G G T A C A G T C A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.846
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif84.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.4 +/- 30.1bp
Average Position of motif in Background51.0 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCTTA
CNAGGCCT--
 A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCTTA
CTAGGCCT--
 A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGCCTTA
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCAGGCCTTA-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCAGGCCTTA
--NGGGATTA
 A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCCTTA
NTCAAGGTCA--
 A C G T A C G T A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGCCTTA
ATGCCAGACN---
 A C G T A C G T A C G T A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCCTTA---
GACCACGCCCTTATT
 A C G T A C G T A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCTTA
BNTGDCCTTG
 A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCCTTA
BTCAAGGTCA--
 A C G T A C G T A G T C G T A C G T C A C T A G A C T G T G A C A G T C A C G T A C G T C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T