Information for 25-CCGGACTGCTCAG (Motif 27)

A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G A G T C C T G A A C T G C G A T A G T C A G T C A C T G A C T G
p-value:1e-5
log p-value:-1.327e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.2 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCGGACTGCTCAG---
------TGCCCAGNHW
 A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.53
Offset:7
Orientation:forward strand
Alignment:CCGGACTGCTCAG
-------GCTCCG
 A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCGGACTGCTCAG-
--GGACCACCCACG
 A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCGGACTGCTCAG
CCWGGAATGY----
 A C G T A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCGGACTGCTCAG
------NGCTN--
 A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CCGGACTGCTCAG--
TACGAGACTCCTCTAAC
 A C G T A C G T A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CCGGACTGCTCAG---
CGAACAGTGCTCACTAT
 A C G T A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCGGACTGCTCAG
CCWGGAATGY----
 A C G T A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CCGGACTGCTCAG-
--------CACAGN
 A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:CCGGACTGCTCAG-------
-----NTGCTGAGTCATCCN
 A G T C G T A C A C T G A C T G C G T A A G T C A G C T A C T G A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T