Homer de novo Motif Results (hs_macrophage_macrophage_undef_HIF1A_SRX212354_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 854
Total background sequences = 42684
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G C T G T A C A T C G C A T G A T G C C G T A A T G C T C A G A G C T G T C A 1e-106-2.444e+0233.84%7.66%21.3bp (42.3bp)HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer(0.969)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C A C T G A T C G C T A G A C T G A C G T A G T C A G T C A C G T C G T A C T A G T G A C A C T G A G T C A G T C T A G C 1e-20-4.778e+011.41%0.01%20.0bp (12.8bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
3 A T G C A G T C T C A G A T C G C T A G C T G A T G C A T C G A G C A T A C T G A G T C C T G A A C T G A C G T A C G T A G T C 1e-17-4.112e+015.15%0.97%25.9bp (31.9bp)GFY(?)/Promoter/Homer(0.772)
More Information | Similar Motifs Found
motif file (matrix)
4 G T C A A C G T A C T G C A G T A C G T A T C G A G T C G T C A C T G A A C G T 1e-16-3.912e+014.22%0.67%25.6bp (30.1bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.890)
More Information | Similar Motifs Found
motif file (matrix)
5 G T A C C G T A A C T G A C G T A C T G A C G T A C T G C T G A T G A C G T A C C G A T C T A G A G C T 1e-15-3.595e+010.82%0.00%7.1bp (0.0bp)EOMES/MA0800.1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
6 A C G T A G C T C G T A C G T A C T G A A C T G A C T G T A C G A T C G G T A C G T C A C T A G T A G C 1e-15-3.559e+011.41%0.03%23.2bp (21.5bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.619)
More Information | Similar Motifs Found
motif file (matrix)
7 C G T A G C A T T A C G T C G A A T G C C G A T A G T C C T G A C A T G A T G C 1e-14-3.259e+016.56%1.93%25.8bp (33.8bp)Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer(0.941)
More Information | Similar Motifs Found
motif file (matrix)
8 A T C G T G A C G T C A G T A C A C T G G A T C G A T C A G T C A T C G A T G C T C G A A C T G A T C G A T C G A G T C A G T C 1e-13-3.091e+010.94%0.01%19.0bp (17.9bp)TFAP2A(var.3)/MA0872.1/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
9 A C G T A T C G G T A C A G T C G T A C A G T C C G T A A C T G A G C T A T C G G C T A A C T G C G A T 1e-13-3.066e+011.05%0.02%23.9bp (25.7bp)Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer(0.586)
More Information | Similar Motifs Found
motif file (matrix)
10 A T C G A C T G G T A C C T G A A T G C A C T G C G T A C T G A A G T C A C T G C A G T A C T G A C G T A C T G A C T G A C T G 1e-13-3.008e+010.70%0.00%23.7bp (15.7bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.570)
More Information | Similar Motifs Found
motif file (matrix)
11 A G T C G T C A G T A C A C T G C G T A A G T C A C G T A C G T A G T C G T A C A T C G A G T C G T C A A T C G A G T C G T A C 1e-13-3.008e+010.70%0.00%18.3bp (0.0bp)ETV6/MA0645.1/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
12 G T C A C A G T A G T C A C T G T G C A A G C T A C G T T A C G A G T C G A C T A G C T A T G C A C G T A T C G A G T C A T G C 1e-12-2.916e+012.69%0.36%27.0bp (26.6bp)ATF4/MA0833.1/Jaspar(0.536)
More Information | Similar Motifs Found
motif file (matrix)
13 C G T A A T G C G T C A A C T G A C T G C G T A C G T A A C T G A G C T C T A G 1e-12-2.896e+013.40%0.61%29.4bp (29.6bp)ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer(0.973)
More Information | Similar Motifs Found
motif file (matrix)
14 C G A T A C G T A C G T T C G A T A G C C T A G A C T G G C T A C T G A C T A G A T G C A T C G C T G A 1e-12-2.839e+011.76%0.12%27.8bp (29.7bp)PB0050.1_Osr1_1/Jaspar(0.726)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C C T G A A T C G A G T C G T A C G T C A A C G T A C T G A T G C G T A C A G T C C G T A A C G T 1e-11-2.666e+011.05%0.03%29.2bp (11.3bp)Klf12/MA0742.1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G A T A C T G A C G T A T G C C G T A A C T G A T G C T C G A C G A T A T C G A G T C C G T A A C T G A C T G A G T C G T A C 1e-11-2.590e+011.05%0.03%25.2bp (24.8bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.552)
More Information | Similar Motifs Found
motif file (matrix)
17 * G A C T A C G T T A G C G A T C A G C T T G A C A G T C A T G C G T A C T C A G 1e-10-2.520e+017.85%3.10%29.6bp (30.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.711)
More Information | Similar Motifs Found
motif file (matrix)
18 * G T C A A G T C A T C G A C G T A C T G G T A C A C G T A G T C C T G A A T C G C G T A G T A C A C T G 1e-10-2.349e+010.82%0.01%16.1bp (27.3bp)PB0099.1_Zfp691_1/Jaspar(0.576)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A G T C A G T C C G T A A T G C C G T A A T C G C A G T A T C G A G T C C G T A A G T C C T A G 1e-9-2.243e+010.82%0.02%16.2bp (31.0bp)ARNT::HIF1A/MA0259.1/Jaspar(0.590)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A C G T A G T C A G T C A G C T A G T C G T A C C A T G A G T C C G T A A C T G A G T C A G T C 1e-9-2.243e+010.82%0.02%30.6bp (20.9bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.571)
More Information | Similar Motifs Found
motif file (matrix)
21 * G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C 1e-9-2.117e+011.52%0.14%22.3bp (24.4bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A C G T A C T G C T G A A T G C A T G C A C G T A C T G C G T A A T G C C G A T C G T A A T C G 1e-9-2.093e+010.59%0.01%29.9bp (21.1bp)SREBF2/MA0596.1/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G A G T C A C G T A G T C A C G T A C T G A T G C C G A T A C T G C T A G A C T G A G T C C G T A 1e-9-2.093e+010.59%0.01%13.5bp (19.2bp)HIC2/MA0738.1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
24 * T C A G C G T A A G C T A C T G G A C T A G T C C G T A A G T C G T A C T G C A 1e-9-2.074e+012.11%0.33%24.8bp (34.3bp)Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer(0.747)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T G T A C G T A C C G T A A G T C T C G A A G T C C A G T G T A C C T A G A G T C A G C T A G T C 1e-8-2.071e+010.82%0.02%28.7bp (30.0bp)Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer(0.638)
More Information | Similar Motifs Found
motif file (matrix)
26 * A G T C A G T C G T C A A G T C C T A G C A G T A C G T T A C G A G T C C G T A 1e-8-1.990e+016.32%2.55%26.0bp (35.7bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.611)
More Information | Similar Motifs Found
motif file (matrix)
27 * C T A G A G T C C G T A C T G A A G T C A G T C C G T A A G T C C G T A A T G C A C T G G T C A C A G T 1e-8-1.942e+010.70%0.02%27.7bp (6.9bp)GLI2/MA0734.1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T A G T C A G T C A C T G A G T C A G T C A C T G A G T C A T G C A T C G A C G T A C T G A G C T 1e-8-1.885e+010.47%0.00%14.5bp (0.0bp)YY1(Zf)/Promoter/Homer(0.600)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G T C A G A G C T A C T G C G A T A T C G T C G A A G T C C G T A A G T C 1e-7-1.810e+011.17%0.10%23.6bp (44.3bp)MGA/MA0801.1/Jaspar(0.765)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G T C A T C G A G T C A G C T A G T C A G C T A G T C A C G T A G T C A G C T A G T C G A C T G A T C 1e-7-1.622e+012.58%0.65%30.4bp (25.0bp)E2F6/MA0471.1/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
31 * A G T C A G T C A G T C A C T G A C T G C G T A A C G T A G T C C G T A A G T C A C T G A C T G C G T A 1e-6-1.609e+010.47%0.01%31.2bp (13.8bp)PB0153.1_Nr2f2_2/Jaspar(0.613)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C A C T G A G T C C G T A G T A C C G T A A G T C A C T G A G T C A C G T 1e-6-1.490e+010.70%0.03%17.3bp (51.2bp)EGR2/MA0472.2/Jaspar(0.746)
More Information | Similar Motifs Found
motif file (matrix)