Information for 10-ABGCKGCCTGCCTGCC (Motif 21)

G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G T A G C C T G A A C T G C T A G A G T C C G T A C T A G A T C G T A G C T G C A C T A G A T G C T A G C C A G T
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.773
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif61.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets53.5 +/- 22.3bp
Average Position of motif in Background55.8 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ABGCKGCCTGCCTGCC-
---CTGGCAGNCTGCCA
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ABGCKGCCTGCCTGCC
---NNACTTGCCTT--
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ABGCKGCCTGCCTGCC
GTCATGCHTGRCTGS-
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ABGCKGCCTGCCTGCC----
----ACTATGCCAACCTACC
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ABGCKGCCTGCCTGCC----
--CCTTCCTTCCTTCCTTCC
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ABGCKGCCTGCCTGCC---
----TGCCTGCGYCMCCTT
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ABGCKGCCTGCCTGCC
-------ATGCCAACC
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ABGCKGCCTGCCTGCC
-------CTGCCCGCA
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ABGCKGCCTGCCTGCC
-------ATGCCCACC
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:ABGCKGCCTGCCTGCC--
--------TTCCCGCCWG
 G T C A A T C G T A C G A G T C A C G T A T C G A T G C A G T C A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G