Homer de novo Motif Results (hs_HepatocellularCarcinoma_HepG2_cancer_USF2_SRX150725_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 737
Total background sequences = 43275
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G T C A G T C A G A G C T A T G C G T C A A G T C T C A G A C G T A C T G T C G A A G T C A G T C A T G C T G C A A G T C 1e-353-8.150e+0248.58%2.56%14.5bp (38.1bp)USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer(0.977)
More Information | Similar Motifs Found		motif file (matrix)
2 A G C T C T A G G T A C G T A C G T A C A G C T A T G C C G A T C T A G A T C G A C T G A T C G A C T G 1e-19-4.558e+015.16%0.72%24.8bp (31.9bp)CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer(0.819)
More Information | Similar Motifs Found		motif file (matrix)
3 A T C G C T A G A T C G C G T A C G T A A G T C C G T A A C G T A G T C C G T A A C T G C G T A C G T A 1e-13-3.105e+010.81%0.00%29.6bp (0.0bp)MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar(0.597)
More Information | Similar Motifs Found		motif file (matrix)
4 A T G C A C T G C G T A A C T G A C T G C G T A A T G C A G T C A T C G A G T C C G T A A C T G T G C A A T C G A G T C A G T C 1e-13-3.105e+010.81%0.00%20.1bp (0.0bp)RUNX3/MA0684.1/Jaspar(0.536)
More Information | Similar Motifs Found		motif file (matrix)
5 * A C T G G T C A C T A G C G T A A C G T A C T G A G C T A C G T A C G T A C T G A G T C A C G T A G T C 1e-11-2.741e+010.95%0.01%22.8bp (33.1bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.659)
More Information | Similar Motifs Found		motif file (matrix)
6 * A C G T A C G T A C G T C G T A C T G A A C T G C G T A C G A T A T G C G T A C C G A T C T A G A C T G A C T G C T A G C G T A 1e-11-2.690e+010.81%0.01%27.2bp (27.9bp)LEF1/MA0768.1/Jaspar(0.628)
More Information | Similar Motifs Found		motif file (matrix)
7 * A G T C G T C A C G T A C G T A C G A T A C T G A T G C C G T A A C T G A C G T A C T G A G C T A C G T 1e-10-2.518e+010.68%0.00%22.7bp (7.3bp)SOX4/MA0867.1/Jaspar(0.801)
More Information | Similar Motifs Found		motif file (matrix)
8 * C G A T A T C G A G T C G T C A C T A G C G T A C T A G C T A G C T A G A G T C 1e-10-2.455e+015.70%1.69%26.3bp (33.5bp)PB0091.1_Zbtb3_1/Jaspar(0.714)
More Information | Similar Motifs Found		motif file (matrix)
9 * A G C T A G T C A C G T A G T C A G C T A T C G A G C T A T C G A G T C C G T A G T C A C T G A A G T C C G T A C G T A A C G T 1e-10-2.448e+010.81%0.01%23.4bp (5.0bp)Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer(0.635)
More Information | Similar Motifs Found		motif file (matrix)
10 * A T G C G A T C G C T A A T G C G T A C A C G T A G T C A G C T C G A T A C T G C G A T A C T G A C G T G T A C A G T C C G T A 1e-10-2.448e+010.81%0.01%24.8bp (20.2bp)CTCF/MA0139.1/Jaspar(0.609)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G A C T G C G T A C T A G A G T C C G T A A C G T A G T C C G T A C T A G A T C G A C G T A C T G A G T C C G T A A C T G 1e-10-2.448e+010.81%0.01%27.8bp (14.2bp)SCRT2/MA0744.1/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
12 * G T A C A G T C G T C A C T G A A G C T A C T G A C T G T G A C A G T C C G A T 1e-10-2.381e+012.04%0.20%26.6bp (29.2bp)NFY(CCAAT)/Promoter/Homer(0.660)
More Information | Similar Motifs Found		motif file (matrix)
13 * A T G C A T C G A G T C G T A C A T G C A T C G T A G C C T A G A G T C A C T G 1e-10-2.356e+012.58%0.36%25.4bp (35.5bp)EGR2/MA0472.2/Jaspar(0.756)
More Information | Similar Motifs Found		motif file (matrix)
14 * A T G C G T A C A C T G A C T G A C T G C G T A A C T G A C T G A C T G A C T G A G T C A T C G A C T G 1e-9-2.262e+010.95%0.02%25.2bp (15.5bp)KLF5/MA0599.1/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)
15 * G T C A C G T A A C T G A G T C C G T A A G T C A C T G C G T A A C T G A C T G 1e-9-2.181e+010.95%0.02%22.0bp (20.9bp)MAX::MYC/MA0059.1/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
16 * A G T C C G T A A C T G A C T G A C T G C T G A A C G T C T A G A G C T A G T C C G T A A G T C A C G T 1e-8-1.949e+010.54%0.00%37.5bp (14.2bp)PB0059.1_Six6_1/Jaspar(0.610)
More Information | Similar Motifs Found		motif file (matrix)
17 * A C T G C G T A A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C T G A G T C A C G T 1e-8-1.949e+010.54%0.00%34.3bp (0.0bp)PH0171.1_Nkx2-1/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C G T A C T G C G T A A C T G G C T A A C T G A T G C A C T G A C T G C T G A A G T C C T A G G T C A C G T A A C T G A C T G 1e-8-1.949e+010.54%0.00%20.7bp (0.0bp)HINFP/MA0131.2/Jaspar(0.597)
More Information | Similar Motifs Found		motif file (matrix)
19 * A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C 1e-7-1.811e+011.76%0.22%29.9bp (23.1bp)POL007.1_BREd/Jaspar(0.678)
More Information | Similar Motifs Found		motif file (matrix)
20 * T G A C A C T G A C T G C T G A G T C A A C T G A G T C A C T G A G T C A C T G A G T C G T A C A G T C A T C G A C T G A C T G 1e-7-1.673e+010.54%0.00%16.6bp (12.6bp)POL006.1_BREu/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)