Information for 10-CCAACAAACC (Motif 19)

A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
Reverse Opposite:
A T C G A C T G C G A T A G C T A C G T A C T G A G C T A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.811e+01
Information Content per bp:1.851
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif93.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets44.3 +/- 29.9bp
Average Position of motif in Background54.6 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCAACAAACC
--NANANAC-
 A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCAACAAACC
CCAATAAAAC
 A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCAACAAACC
--AACAAT--
 A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAACAAACC
CCAATAAAAA
 A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAACAAACC
TGCCAA------
 A C G T A C G T A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAACAAACC---
AACCCAATAAAATTCG
 A C G T A C G T A C G T A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAACAAACC
CCYMATAAAA-
 A C G T A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCAACAAACC
CCAATAAAAA
 A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAACAAACC
RNAACAATGG
 A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCAACAAACC
AAACAAACATTC-
 A C G T A C G T A C G T A G T C G T A C C G T A C T G A T G A C G T C A C T G A C G T A A G T C T A G C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T