Homer de novo Motif Results (hs_HepatocellularCarcinoma_HepG2_cancer_ARID3A_SRX150355_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 823
Total background sequences = 48697
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G G A T C A G T C C G T A T A G C G A C T C G T A C A T G C T A G A C T G A C T G A C T G G T A C T C A G A T C G A G T C 1e-191-4.414e+0216.04%0.24%17.5bp (26.5bp)CTCF/MA0139.1/Jaspar(0.967)
More Information | Similar Motifs Found
motif file (matrix)
2 A C T G G A T C C G T A T C G A C G T A C A T G C A G T G A T C G A T C G C T A 1e-40-9.222e+0114.58%3.37%27.2bp (28.6bp)HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer(0.894)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T C T A G A G C T C A G T A C G T C T G A A G T C G C A T G A C T G C A T C A G T A C G T G C A T 1e-29-6.729e+0117.98%6.36%23.1bp (29.4bp)FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer(0.960)
More Information | Similar Motifs Found
motif file (matrix)
4 A T C G T G C A A C G T A C T G C T G A T A G C C G A T T G A C C G T A A G C T 1e-23-5.466e+017.41%1.45%28.5bp (29.2bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.990)
More Information | Similar Motifs Found
motif file (matrix)
5 T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C 1e-22-5.164e+014.86%0.61%23.6bp (28.6bp)HNF1B/MA0153.2/Jaspar(0.899)
More Information | Similar Motifs Found
motif file (matrix)
6 G C T A A T G C A T G C G A T C G C A T A C G T C G A T A T C G C G T A G C A T 1e-20-4.698e+0110.57%3.28%25.7bp (28.6bp)PB0040.1_Lef1_1/Jaspar(0.878)
More Information | Similar Motifs Found
motif file (matrix)
7 A G C T C T G A A C G T A C G T A C T G A G T C G C A T A G T C G T C A C G T A A G C T T C G A C G A T 1e-17-3.954e+012.07%0.09%23.4bp (27.4bp)CEBPA/MA0102.3/Jaspar(0.881)
More Information | Similar Motifs Found
motif file (matrix)
8 T G A C G C T A G T A C A G T C C G T A C A T G G C A T C A T G A T C G C G T A C G T A C T G A G T C A C G T A T C G A C T G A 1e-13-3.021e+011.34%0.04%28.4bp (25.2bp)NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.613)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A C G T A C G T G A C T C G T A C G T A C G T A C G T A C G T A A T G C G T A C C G T A C T G A C A T G C G A T G C T A 1e-11-2.656e+011.09%0.03%22.0bp (28.9bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.712)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C 1e-11-2.611e+011.46%0.08%23.1bp (28.8bp)HOXB13/MA0901.1/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G A T A T G C C G A T A G T C G A T C C G A T A C T G G T A C A C G T A C G T A G T C A C G T A T C G C G A T A G T C A C G T 1e-11-2.581e+011.46%0.08%23.1bp (24.5bp)PB0207.1_Zic3_2/Jaspar(0.564)
More Information | Similar Motifs Found
motif file (matrix)
12 * C T A G C G T A C T A G A G T C C G T A C G T A C G T A G A C T C G T A A G C T A C G T A C G T C T A G 1e-10-2.519e+011.58%0.11%27.8bp (31.8bp)Foxd3/MA0041.1/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)
13 * T A G C T C A G A G C T A C G T A C T G A G T C C T G A A C G T T G A C C G T A 1e-10-2.419e+012.92%0.52%24.3bp (30.7bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.917)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C C G A T A T C G T C G A A C T G A G T C A G T C C G T A A C G T A C T G C T G A A G T C C G A T 1e-9-2.274e+010.73%0.01%37.2bp (8.1bp)MAFG::NFE2L1/MA0089.1/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
15 * C T A G C A T G A C T G A G T C A G C T A C G T C T A G C G A T A C G T A C G T 1e-9-2.217e+012.19%0.31%24.9bp (27.8bp)Foxj2/MA0614.1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C G T A C T G A C G T C G A T C G A T A G C T A G T C G T C A A C G T A C G T A G T C A G T C 1e-9-2.169e+010.61%0.00%25.2bp (0.0bp)FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer(0.640)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A C G T C G T A C A G T C G A T A C T G C T G A G A C T A G T C A C G T 1e-8-1.877e+010.97%0.05%18.0bp (26.7bp)HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer(0.709)
More Information | Similar Motifs Found
motif file (matrix)