Information for 11-ATTTATCGGC (Motif 10)

C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
Reverse Opposite:
A C T G A G T C G T A C A T C G C G T A A C G T C G T A G T C A C G T A G A C T
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.851
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.3 +/- 23.1bp
Average Position of motif in Background48.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATCGGC
NTTTTATTGG-
 A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATCGGC
TTTTTATTGG-
 A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATCGGC
TGATTTATGGCC
 A C G T A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ATTTATCGGC
TTTTATKRGG
 C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATCGGC
NTGATTTATGGCC
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATCGGC
TGATTTATGGCC
 A C G T A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATCGGC
NTTTTATTGG-
 A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTATCGGC
TTTTATTRGN
 C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATCGGC
DGWTTTATGRCN
 A C G T A C G T C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTTATCGGC
TTTAATTGCN
 C G T A A C G T A C G T A C G T G T C A C G A T A T G C C A T G C T A G A G T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C