Information for 4-GTTAATAATTRAC (Motif 5)

T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C
Reverse Opposite:
A C T G C A G T G A C T C G T A G T C A C G A T A C G T C G T A C A G T A C G T C T G A C T G A A G T C
p-value:1e-22
log p-value:-5.164e+01
Information Content per bp:1.645
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif291.7
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets54.9 +/- 23.6bp
Average Position of motif in Background46.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GTTAATAATTRAC
GTTAATNATTAAC
 T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C

HNF1A/MA0046.2/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GTTAATAATTRAC-
AGTTAATGATTAACT
 A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:GTTAATAATTRAC
-TTAATNATTAAC
 T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C
A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTTAATAATTRAC
GGTTAAACATTAA-
 A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GTTAATAATTRAC---
GATTATTAATTAACTTG
 A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GTTAATAATTRAC
---AATAATT---
 T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

PH0059.1_Hoxb4/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATAATTRAC---
GNTNATTAATTAACNNG
 A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C A C G T A C G T A C G T
C T A G C A T G A C G T C G T A T C G A G A C T G A C T G T C A C G T A C G A T A C G T C T G A C T G A A G T C C A T G A G T C A T C G

PH0018.1_Dbx1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTTAATAATTRAC--
TNATTATTAATTAATTA
 A C G T A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C A C G T A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

PH0176.1_Vsx1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATAATTRAC---
ANTNATTAATTAACTNG
 A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C A C G T A C G T A C G T
T C G A C G T A A C G T G A C T C T G A G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A T C C A G T A T G C C A T G

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTAATAATTRAC---
NNTNATTAATTAATTCG
 A C G T T C A G A G C T A G C T G T C A G T C A G C A T T G C A C G T A A C G T G C A T C T G A G C T A G T A C A C G T A C G T A C G T
C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G