Homer de novo Motif Results (hs_HepatocellularCarcin_HepG2_Cancer_USF2_SRX2733485_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 743
Total background sequences = 44478
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C 1e-331-7.638e+0247.78%2.85%18.3bp (36.3bp)USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer(0.960)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C C G A T A T G C C G A T A C G T A C T G A C G T A C T G A C G T G T C A A G T C C G T A A G T C 1e-14-3.238e+010.94%0.01%26.4bp (0.0bp)PB0104.1_Zscan4_1/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
3 A T C G A G T C G T A C A G T C A C G T A C G T A C G T A C T G C G T A A G C T A G T C A C G T A G C T 1e-13-3.117e+010.81%0.00%26.5bp (8.3bp)Tcf7/MA0769.1/Jaspar(0.887)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C C G T A A T C G C G T A T C G A A C G T A C T G A C G T A T C G C G T A A G T C A C G T A C G T 1e-12-2.955e+010.94%0.01%22.8bp (6.4bp)Nr2e1/MA0676.1/Jaspar(0.628)
More Information | Similar Motifs Found
motif file (matrix)
5 * C T G A A G T C A C G T A C G T A T C G C G A T A C G T A G C T C G T A A T C G C T G A G T A C C G T A 1e-11-2.601e+010.94%0.01%20.2bp (26.7bp)Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer(0.668)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G A C T G C G T A A C T G T A G C A C T G A C T G C G T A A C T G A C G T A G T C A C T G A C T G A C T G A C T G A C G T 1e-10-2.528e+010.67%0.00%29.8bp (13.7bp)SP2/MA0516.1/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G C G T A A C G T A C G T A C T G A C T G A G T C G T A C A C T G C T G A 1e-10-2.401e+011.48%0.08%25.7bp (27.8bp)NFY(CCAAT)/Promoter/Homer(0.828)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G T A A T C G A T G C G T C A T C G A C G T A A G T C C G T A A G C T C A G T 1e-10-2.347e+012.29%0.27%28.2bp (34.2bp)Foxd3/MA0041.1/Jaspar(0.753)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A T C G G A C T A G T C C T G A A G T C A C G T A C T G G T C A A C G T A C G T A C T G A C T G 1e-9-2.289e+010.81%0.01%20.5bp (27.7bp)NFYA/MA0060.2/Jaspar(0.773)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A C T G A C T G A G T C C T A G G T A C A C T G A G T C A C T G A G T C A G T C A G T C A T G C A G C T A T C G C T G A 1e-9-2.182e+010.67%0.01%21.7bp (17.0bp)PB0095.1_Zfp161_1/Jaspar(0.699)
More Information | Similar Motifs Found
motif file (matrix)
11 * C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A 1e-8-1.996e+011.75%0.18%29.8bp (27.6bp)Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer(0.710)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C C T G A A C G T A C G T A C T G G T A C C G T A A G C T G T C A C T G A 1e-8-1.991e+011.48%0.12%25.9bp (28.8bp)MF0006.1_bZIP_cEBP-like_subclass/Jaspar(0.832)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G C T T C A G A C T G G T A C T G A C T C A G A C T G T G C A C T A G T G C A 1e-8-1.899e+013.10%0.70%25.1bp (32.7bp)E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer(0.670)
More Information | Similar Motifs Found
motif file (matrix)
14 * G T C A A G C T C G T A C T A G A G T C G T C A A C T G A T G C A G C T C T G A A T C G A G T C A C G T C T A G A G T C A C G T 1e-7-1.692e+010.81%0.03%19.4bp (23.4bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.593)
More Information | Similar Motifs Found
motif file (matrix)
15 * A T C G T A G C A C T G G T A C A T C G A C T G A T G C T A C G A T C G C T A G 1e-4-1.144e+013.90%1.57%28.2bp (31.6bp)Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer(0.721)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G A T C G A T C G A T C G A T G C A T G C A T A G C T A G C T A C G T A C G T C A G T A G C T C A G T A C G T G C A T G C A T 1e-2-5.819e+000.94%0.25%28.9bp (21.8bp)PB0182.1_Srf_2/Jaspar(0.752)
More Information | Similar Motifs Found
motif file (matrix)