Information for 7-TCTAAATCAA (Motif 11)

C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G G C T A A C G T A G C T A C G T C G T A A T C G G T C A
p-value:1e-8
log p-value:-1.996e+01
Information Content per bp:1.845
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif81.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets51.9 +/- 29.8bp
Average Position of motif in Background55.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCTAAATCAA-
-HNRAATCAAT
 C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCTAAATCAA--
--CAAATCACTG
 C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCTAAATCAA----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCTAAATCAA
GGCCATAAATCAC
 A C G T A C G T A C G T C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCTAAATCAA-----
CGACCCAATCAACGGTG
 A C G T A C G T C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTAAATCAA-------
TATAGATCAAAGGAAAA
 C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCTAAATCAA
GGCCATAAATCA-
 A C G T A C G T A C G T C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCTAAATCAA---
---TAATCAATTA
 C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCTAAATCAA
--CCAATCAA
 C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTAAATCAA-------
NNNAGATCAAAGGANNN
 C A G T A T G C G C A T C G T A C T G A C G T A C G A T T G A C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T