Information for 1-NNNNNGRYCACGTGRC (Motif 1)

A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
Reverse Opposite:
T C A G A G C T A G T C C T G A A G T C T C A G A C G T A T C G T C G A A G T C A G T C A T C G A T G C A C T G A T C G T C A G
p-value:1e-331
log p-value:-7.638e+02
Information Content per bp:1.531
Number of Target Sequences with motif355.0
Percentage of Target Sequences with motif47.78%
Number of Background Sequences with motif1267.5
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets52.5 +/- 18.3bp
Average Position of motif in Background51.1 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.96
Offset:5
Orientation:forward strand
Alignment:NNNNNGRYCACGTGRC
-----GGTCACGTGA-
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.95
Offset:6
Orientation:forward strand
Alignment:NNNNNGRYCACGTGRC
------ATCACGTGAC
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.95
Offset:6
Orientation:reverse strand
Alignment:NNNNNGRYCACGTGRC
------ACCACGTGAC
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C

TFEC/MA0871.1/Jaspar

Match Rank:4
Score:0.95
Offset:6
Orientation:reverse strand
Alignment:NNNNNGRYCACGTGRC
------NTCACGTGAT
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.94
Offset:8
Orientation:reverse strand
Alignment:NNNNNGRYCACGTGRC
--------CACGTGNC
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:NNNNNGRYCACGTGRC
----NNACCACGTGGT
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.94
Offset:6
Orientation:forward strand
Alignment:NNNNNGRYCACGTGRC
------ATCACGTGAC
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.94
Offset:8
Orientation:reverse strand
Alignment:NNNNNGRYCACGTGRC
--------CACGTGDC
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.93
Offset:5
Orientation:reverse strand
Alignment:NNNNNGRYCACGTGRC
-----GGTCACGTGGC
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.93
Offset:6
Orientation:forward strand
Alignment:NNNNNGRYCACGTGRC
------ACCACGTG--
 A G T C T A G C T G A C T A C G T A C G T C A G T C A G A G C T A T G C C G T A A G T C T C A G A G C T A C T G T C G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T