Homer de novo Motif Results (hs_HeLaLTRLuciferasec_HeLaLTRLuciferasec_undef_NELFE_SRX684291_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 584
Total background sequences = 47833
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A C A T G T C A G T G A C C G T A C T A G A T G C C G T A A C T G C G A T A C T G C T G A A G T C C G T A C G T A A C T G 1e-13-3.198e+011.20%0.01%17.8bp (21.5bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.594)
More Information | Similar Motifs Found
motif file (matrix)
2 C G T A A C T G A G C T A G T C C G A T A C G T C A G T A T C G G T A C C G A T A C T G G A T C C G A T 1e-13-3.087e+011.88%0.05%18.7bp (31.4bp)TCF7L2/MA0523.1/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)
3 A G T C A C G T A T C G C T A G A C T G A C T G A C G T A G C T G T C A C G A T C T G A A C T G A G T C 1e-12-2.911e+011.03%0.01%31.0bp (25.1bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
4 * C T G A A C T G A C T G G T C A C T G A A G T C G C A T A G C T C T A G C T A G A C T G C T A G A C G T C G T A C T G A T G A C 1e-11-2.701e+010.86%0.00%22.5bp (0.0bp)Ar/MA0007.3/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C 1e-10-2.356e+010.86%0.01%23.5bp (19.6bp)PB0080.1_Tbp_1/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C C G T A A C G T C T A G T A C G C G T A 1e-10-2.356e+010.86%0.00%24.6bp (25.5bp)PB0154.1_Osr1_2/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A G C T C G T A C G A T A C T G A G T C A G T C A C T G A C T G A C T G A G T C C G T A A C T G 1e-10-2.356e+010.86%0.01%22.3bp (25.8bp)THAP1/MA0597.1/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C A C G T A G T C C G T A A G T C A C G T A T G C C G T A C G A T C T A G C G T A A C G T A C T G A G T C C G T A G T A C 1e-10-2.356e+010.86%0.01%16.7bp (9.1bp)ZNF143/MA0088.2/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G T C A C T G C G T A A C T G A C T G A T G C T A C G T A C G A G C T A C T G 1e-10-2.313e+011.54%0.06%23.2bp (24.3bp)Sp1(Zf)/Promoter/Homer(0.599)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C G T A G C T G T A C A G T C A C T G A T C G C T A G C G A T C T A G A C T G A T G C A G T C A G C T 1e-9-2.220e+011.71%0.09%32.4bp (21.8bp)EHF/MA0598.2/Jaspar(0.659)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T C T A G A G T C A G C T T G C A C T G A A C T G A G T C C G T A A C T G 1e-9-2.152e+013.08%0.46%24.9bp (29.3bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.641)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C 1e-9-2.096e+010.68%0.00%20.9bp (0.0bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.595)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A G T C A G T C A C T G A C T G A T C G A G T C A C G T A G T C A T C G A C T G A C T G A C G T 1e-9-2.096e+010.68%0.00%25.7bp (0.0bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.544)
More Information | Similar Motifs Found
motif file (matrix)
14 * G T A C A G T C C G A T A G T C A C G T T C G A G T A C A G C T C G T A C G T A C G T A T A G C G T A C 1e-9-2.096e+010.68%0.00%26.9bp (13.9bp)HOXA13/MA0650.1/Jaspar(0.539)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A G T C A C G T A T G C A C G T A C T G A G C T T C G A A G T C A G T C T C G A A C T G A C G T 1e-9-2.085e+011.03%0.02%21.0bp (23.2bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.625)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C T G C T G A A C G T A G T C A G T C A G C T A C G T A G T C A G T C G T A C C G T A A G T C 1e-7-1.819e+010.68%0.00%16.7bp (2.9bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.642)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A C T A G C T G A G T C A C G T A G T C A T C G A C A G T A G T C G A C T 1e-7-1.749e+013.94%0.96%29.1bp (26.9bp)PB0148.1_Mtf1_2/Jaspar(0.648)
More Information | Similar Motifs Found
motif file (matrix)
18 * T G C A G C A T G A T C C T G A G A C T T G C A G A C T G T A C C G T A T A C G G T C A C G A T A C T G 1e-6-1.466e+011.03%0.05%28.1bp (25.9bp)SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer(0.743)
More Information | Similar Motifs Found
motif file (matrix)
19 * G C A T G A C T A G C T G C A T A C G T A G C T A C G T A C G T A G C T A C G T C G A T C A G T C A G T A C G T C A G T C G A T 1e-2-5.692e+001.20%0.33%19.4bp (23.0bp)PB0093.1_Zfp105_1/Jaspar(0.757)
More Information | Similar Motifs Found
motif file (matrix)