p-value: | 1e-13 |
log p-value: | -3.198e+01 |
Information Content per bp: | 1.851 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 1.20% |
Number of Background Sequences with motif | 3.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 32.6 +/- 17.8bp |
Average Position of motif in Background | 54.0 +/- 21.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AKRMARSAGTGRCAAG --------TTGCCAAG |
|
|
|
NFIA/MA0670.1/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | AKRMARSAGTGRCAAG- -------GGTGCCAAGT |
|
|
|
MEIS3/MA0775.1/Jaspar
Match Rank: | 3 |
Score: | 0.55 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AKRMARSAGTGRCAAG --------TTGACAGG |
|
|
|
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | AKRMARSAGTGRCAAG -------RHTGWCAR- |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 5 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AKRMARSAGTGRCAAG ----NTGATTGACAGN |
|
|
|
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AKRMARSAGTGRCAAG ----BTGABTGACAGS |
|
|
|
Pax2/MA0067.1/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AKRMARSAGTGRCAAG ------NCGTGACN-- |
|
|
|
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AKRMARSAGTGRCAAG- -----TGAGTGACAGSC |
|
|
|
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | AKRMARSAGTGRCAAG ------ARNTGACA-- |
|
|
|
MEIS1/MA0498.2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | AKRMARSAGTGRCAAG --------TTGACAG- |
|
|
|