Information for 4-TTTATATMAAGSM (Motif 5)

A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
Reverse Opposite:
A C T G A T G C A G T C A C G T A C G T A C T G C G T A A C G T C G T A A C G T G T C A C G T A C G T A
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.897
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.2 +/- 23.5bp
Average Position of motif in Background59.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TTTATATMAAGSM
NANTTATATATAANGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATATMAAGSM
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------TTTATATMAAGSM
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTATATMAAGSM
NTGTTTAYATWW----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTATATMAAGSM
NNNTTTNTAATACNG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTATATMAAGSM
ANGTTACATAA----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TTTATATMAAGSM
NNNTTTGTTTACATTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTATATMAAGSM
CBTGTTTAYAWW-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T A C G T

HLF/MA0043.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTTATATMAAGSM
NGTTACGTAANN--
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTATATMAAGSM
VTTRCATAAY---
 A C G T A C G T A C G T C G T A A C G T C G T A A C G T G T A C C G T A C G T A A C T G A T C G G T A C
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T