Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-44 | -1.036e+02 | 0.0000 | 244.0 | 32.49% | 6011.8 | 12.58% | motif file (matrix) |
svg |
2 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-43 | -9.996e+01 | 0.0000 | 191.0 | 25.43% | 3999.5 | 8.37% | motif file (matrix) |
svg |
3 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-42 | -9.746e+01 | 0.0000 | 151.0 | 20.11% | 2641.1 | 5.53% | motif file (matrix) |
svg |
4 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-35 | -8.128e+01 | 0.0000 | 111.0 | 14.78% | 1711.7 | 3.58% | motif file (matrix) |
svg |
5 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-34 | -8.054e+01 | 0.0000 | 130.0 | 17.31% | 2333.3 | 4.88% | motif file (matrix) |
svg |
6 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-34 | -7.881e+01 | 0.0000 | 165.0 | 21.97% | 3640.1 | 7.62% | motif file (matrix) |
svg |
7 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-34 | -7.868e+01 | 0.0000 | 103.0 | 13.72% | 1522.6 | 3.19% | motif file (matrix) |
svg |
8 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-32 | -7.544e+01 | 0.0000 | 283.0 | 37.68% | 9007.8 | 18.85% | motif file (matrix) |
svg |
9 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-25 | -5.950e+01 | 0.0000 | 123.0 | 16.38% | 2652.6 | 5.55% | motif file (matrix) |
svg |
10 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-21 | -4.891e+01 | 0.0000 | 76.0 | 10.12% | 1306.6 | 2.73% | motif file (matrix) |
svg |
11 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-19 | -4.485e+01 | 0.0000 | 74.0 | 9.85% | 1337.8 | 2.80% | motif file (matrix) |
svg |
12 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-17 | -3.952e+01 | 0.0000 | 117.0 | 15.58% | 3137.6 | 6.57% | motif file (matrix) |
svg |
13 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-16 | -3.831e+01 | 0.0000 | 190.0 | 25.30% | 6547.7 | 13.71% | motif file (matrix) |
svg |
14 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-16 | -3.742e+01 | 0.0000 | 26.0 | 3.46% | 179.3 | 0.38% | motif file (matrix) |
svg |
15 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-15 | -3.645e+01 | 0.0000 | 128.0 | 17.04% | 3752.4 | 7.85% | motif file (matrix) |
svg |
16 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-14 | -3.339e+01 | 0.0000 | 74.0 | 9.85% | 1663.4 | 3.48% | motif file (matrix) |
svg |
17 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-13 | -3.183e+01 | 0.0000 | 79.0 | 10.52% | 1908.9 | 4.00% | motif file (matrix) |
svg |
18 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-13 | -3.146e+01 | 0.0000 | 29.0 | 3.86% | 297.1 | 0.62% | motif file (matrix) |
svg |
19 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-13 | -3.095e+01 | 0.0000 | 116.0 | 15.45% | 3500.3 | 7.33% | motif file (matrix) |
svg |
20 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-11 | -2.731e+01 | 0.0000 | 77.0 | 10.25% | 2006.9 | 4.20% | motif file (matrix) |
svg |
21 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-10 | -2.518e+01 | 0.0000 | 107.0 | 14.25% | 3413.8 | 7.15% | motif file (matrix) |
svg |
22 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-10 | -2.500e+01 | 0.0000 | 34.0 | 4.53% | 530.4 | 1.11% | motif file (matrix) |
svg |
23 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-10 | -2.306e+01 | 0.0000 | 58.0 | 7.72% | 1420.7 | 2.97% | motif file (matrix) |
svg |
24 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-8 | -2.071e+01 | 0.0000 | 71.0 | 9.45% | 2056.7 | 4.30% | motif file (matrix) |
svg |
25 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-8 | -1.932e+01 | 0.0000 | 59.0 | 7.86% | 1616.0 | 3.38% | motif file (matrix) |
svg |
26 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-8 | -1.927e+01 | 0.0000 | 25.0 | 3.33% | 380.3 | 0.80% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-6 | -1.550e+01 | 0.0000 | 62.0 | 8.26% | 1942.0 | 4.06% | motif file (matrix) |
svg |
28 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-6 | -1.530e+01 | 0.0000 | 254.0 | 33.82% | 12178.3 | 25.49% | motif file (matrix) |
svg |
29 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.420e+01 | 0.0000 | 190.0 | 25.30% | 8670.1 | 18.15% | motif file (matrix) |
svg |
30 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-6 | -1.385e+01 | 0.0000 | 169.0 | 22.50% | 7547.1 | 15.80% | motif file (matrix) |
svg |
31 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-5 | -1.374e+01 | 0.0000 | 56.0 | 7.46% | 1775.4 | 3.72% | motif file (matrix) |
svg |
32 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-5 | -1.313e+01 | 0.0000 | 71.0 | 9.45% | 2512.5 | 5.26% | motif file (matrix) |
svg |
33 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-5 | -1.232e+01 | 0.0000 | 27.0 | 3.60% | 630.5 | 1.32% | motif file (matrix) |
svg |
34 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-5 | -1.178e+01 | 0.0001 | 102.0 | 13.58% | 4182.6 | 8.75% | motif file (matrix) |
svg |
35 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-5 | -1.174e+01 | 0.0001 | 52.0 | 6.92% | 1716.2 | 3.59% | motif file (matrix) |
svg |
36 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-4 | -1.052e+01 | 0.0003 | 14.0 | 1.86% | 232.3 | 0.49% | motif file (matrix) |
svg |
37 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.046e+01 | 0.0003 | 170.0 | 22.64% | 8056.8 | 16.86% | motif file (matrix) |
svg |
38 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-4 | -1.013e+01 | 0.0004 | 75.0 | 9.99% | 2957.0 | 6.19% | motif file (matrix) |
svg |
39 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.011e+01 | 0.0004 | 225.0 | 29.96% | 11288.2 | 23.63% | motif file (matrix) |
svg |
40 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-4 | -9.700e+00 | 0.0006 | 4.0 | 0.53% | 13.3 | 0.03% | motif file (matrix) |
svg |
41 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-3 | -8.607e+00 | 0.0016 | 47.0 | 6.26% | 1700.1 | 3.56% | motif file (matrix) |
svg |
42 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-3 | -8.335e+00 | 0.0021 | 55.0 | 7.32% | 2114.6 | 4.43% | motif file (matrix) |
svg |
43 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-3 | -8.333e+00 | 0.0021 | 73.0 | 9.72% | 3031.7 | 6.35% | motif file (matrix) |
svg |
44 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -8.140e+00 | 0.0024 | 30.0 | 3.99% | 942.5 | 1.97% | motif file (matrix) |
svg |
45 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-3 | -7.956e+00 | 0.0028 | 7.0 | 0.93% | 81.8 | 0.17% | motif file (matrix) |
svg |
46 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.775e+00 | 0.0033 | 92.0 | 12.25% | 4105.1 | 8.59% | motif file (matrix) |
svg |
47 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.473e+00 | 0.0044 | 251.0 | 33.42% | 13348.3 | 27.94% | motif file (matrix) |
svg |
48 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-3 | -7.414e+00 | 0.0046 | 52.0 | 6.92% | 2047.4 | 4.29% | motif file (matrix) |
svg |
49 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-3 | -7.327e+00 | 0.0049 | 37.0 | 4.93% | 1318.8 | 2.76% | motif file (matrix) |
svg |
50 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.056e+00 | 0.0063 | 114.0 | 15.18% | 5419.7 | 11.34% | motif file (matrix) |
svg |
51 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-3 | -6.931e+00 | 0.0070 | 74.0 | 9.85% | 3243.7 | 6.79% | motif file (matrix) |
svg |
52 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-3 | -6.911e+00 | 0.0070 | 10.0 | 1.33% | 190.0 | 0.40% | motif file (matrix) |
svg |
53 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-2 | -6.903e+00 | 0.0070 | 19.0 | 2.53% | 532.2 | 1.11% | motif file (matrix) |
svg |
54 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -6.538e+00 | 0.0098 | 100.0 | 13.32% | 4717.8 | 9.88% | motif file (matrix) |
svg |
55 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -5.941e+00 | 0.0174 | 17.0 | 2.26% | 494.0 | 1.03% | motif file (matrix) |
svg |
56 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.698e+00 | 0.0218 | 71.0 | 9.45% | 3241.3 | 6.78% | motif file (matrix) |
svg |
57 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -5.667e+00 | 0.0221 | 16.0 | 2.13% | 465.5 | 0.97% | motif file (matrix) |
svg |
58 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.292e+00 | 0.0316 | 23.0 | 3.06% | 802.5 | 1.68% | motif file (matrix) |
svg |
59 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.054e+00 | 0.0394 | 19.0 | 2.53% | 632.2 | 1.32% | motif file (matrix) |
svg |
60 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.045e+00 | 0.0394 | 139.0 | 18.51% | 7221.9 | 15.12% | motif file (matrix) |
svg |
61 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -4.905e+00 | 0.0442 | 4.0 | 0.53% | 48.9 | 0.10% | motif file (matrix) |
svg |
62 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -4.838e+00 | 0.0465 | 39.0 | 5.19% | 1639.0 | 3.43% | motif file (matrix) |
svg |
63 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.765e+00 | 0.0492 | 78.0 | 10.39% | 3769.8 | 7.89% | motif file (matrix) |
svg |
64 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.707e+00 | 0.0514 | 8.0 | 1.07% | 182.9 | 0.38% | motif file (matrix) |
svg |
65 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.638e+00 | 0.0542 | 6.0 | 0.80% | 113.4 | 0.24% | motif file (matrix) |
svg |
66 |
| RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -4.635e+00 | 0.0542 | 36.0 | 4.79% | 1505.2 | 3.15% | motif file (matrix) |
svg |
67 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -4.629e+00 | 0.0542 | 31.0 | 4.13% | 1249.6 | 2.62% | motif file (matrix) |
svg |