Homer Known Motif Enrichment Results (hs_EmbryonicStemCell_H9hESC_normal_EOMES_SRX035159_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 751, Total Background Sequences = 47789
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-44-1.036e+020.0000244.032.49%6011.812.58%motif file (matrix) svg
2 G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-43-9.996e+010.0000191.025.43%3999.58.37%motif file (matrix) svg
3 T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-42-9.746e+010.0000151.020.11%2641.15.53%motif file (matrix) svg
4 A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-35-8.128e+010.0000111.014.78%1711.73.58%motif file (matrix) svg
5 A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer1e-34-8.054e+010.0000130.017.31%2333.34.88%motif file (matrix) svg
6 C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer1e-34-7.881e+010.0000165.021.97%3640.17.62%motif file (matrix) svg
7 T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-34-7.868e+010.0000103.013.72%1522.63.19%motif file (matrix) svg
8 C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-32-7.544e+010.0000283.037.68%9007.818.85%motif file (matrix) svg
9 C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-25-5.950e+010.0000123.016.38%2652.65.55%motif file (matrix) svg
10 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-21-4.891e+010.000076.010.12%1306.62.73%motif file (matrix) svg
11 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-19-4.485e+010.000074.09.85%1337.82.80%motif file (matrix) svg
12 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-17-3.952e+010.0000117.015.58%3137.66.57%motif file (matrix) svg
13 A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-16-3.831e+010.0000190.025.30%6547.713.71%motif file (matrix) svg
14 T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer1e-16-3.742e+010.000026.03.46%179.30.38%motif file (matrix) svg
15 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-15-3.645e+010.0000128.017.04%3752.47.85%motif file (matrix) svg
16 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-14-3.339e+010.000074.09.85%1663.43.48%motif file (matrix) svg
17 A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-13-3.183e+010.000079.010.52%1908.94.00%motif file (matrix) svg
18 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-13-3.146e+010.000029.03.86%297.10.62%motif file (matrix) svg
19 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-13-3.095e+010.0000116.015.45%3500.37.33%motif file (matrix) svg
20 A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-11-2.731e+010.000077.010.25%2006.94.20%motif file (matrix) svg
21 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-10-2.518e+010.0000107.014.25%3413.87.15%motif file (matrix) svg
22 C G T A C G A T G A C T G A C T T G A C C T G A A T G C C T G A T A G C A G T C A C G T T C G A C A T G T A C G G A C T A T C G G A C T A C G T C T G A T C G A C G T A Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-10-2.500e+010.000034.04.53%530.41.11%motif file (matrix) svg
23 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-10-2.306e+010.000058.07.72%1420.72.97%motif file (matrix) svg
24 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-8-2.071e+010.000071.09.45%2056.74.30%motif file (matrix) svg
25 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-8-1.932e+010.000059.07.86%1616.03.38%motif file (matrix) svg
26 C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer1e-8-1.927e+010.000025.03.33%380.30.80%motif file (matrix) svg
27 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-6-1.550e+010.000062.08.26%1942.04.06%motif file (matrix) svg
28 C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-6-1.530e+010.0000254.033.82%12178.325.49%motif file (matrix) svg
29 A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-6-1.420e+010.0000190.025.30%8670.118.15%motif file (matrix) svg
30 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-6-1.385e+010.0000169.022.50%7547.115.80%motif file (matrix) svg
31 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-5-1.374e+010.000056.07.46%1775.43.72%motif file (matrix) svg
32 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-5-1.313e+010.000071.09.45%2512.55.26%motif file (matrix) svg
33 A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer1e-5-1.232e+010.000027.03.60%630.51.32%motif file (matrix) svg
34 T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer1e-5-1.178e+010.0001102.013.58%4182.68.75%motif file (matrix) svg
35 C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-5-1.174e+010.000152.06.92%1716.23.59%motif file (matrix) svg
36 T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-4-1.052e+010.000314.01.86%232.30.49%motif file (matrix) svg
37 G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer1e-4-1.046e+010.0003170.022.64%8056.816.86%motif file (matrix) svg
38 A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-4-1.013e+010.000475.09.99%2957.06.19%motif file (matrix) svg
39 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-4-1.011e+010.0004225.029.96%11288.223.63%motif file (matrix) svg
40 C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-4-9.700e+000.00064.00.53%13.30.03%motif file (matrix) svg
41 T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-3-8.607e+000.001647.06.26%1700.13.56%motif file (matrix) svg
42 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-3-8.335e+000.002155.07.32%2114.64.43%motif file (matrix) svg
43 C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-3-8.333e+000.002173.09.72%3031.76.35%motif file (matrix) svg
44 A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-3-8.140e+000.002430.03.99%942.51.97%motif file (matrix) svg
45 T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C GFY-Staf(?,Zf)/Promoter/Homer1e-3-7.956e+000.00287.00.93%81.80.17%motif file (matrix) svg
46 C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer1e-3-7.775e+000.003392.012.25%4105.18.59%motif file (matrix) svg
47 C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-3-7.473e+000.0044251.033.42%13348.327.94%motif file (matrix) svg
48 C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer1e-3-7.414e+000.004652.06.92%2047.44.29%motif file (matrix) svg
49 T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer1e-3-7.327e+000.004937.04.93%1318.82.76%motif file (matrix) svg
50 A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-3-7.056e+000.0063114.015.18%5419.711.34%motif file (matrix) svg
51 G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-3-6.931e+000.007074.09.85%3243.76.79%motif file (matrix) svg
52 A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-3-6.911e+000.007010.01.33%190.00.40%motif file (matrix) svg
53 T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-2-6.903e+000.007019.02.53%532.21.11%motif file (matrix) svg
54 C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-2-6.538e+000.0098100.013.32%4717.89.88%motif file (matrix) svg
55 G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-2-5.941e+000.017417.02.26%494.01.03%motif file (matrix) svg
56 C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-2-5.698e+000.021871.09.45%3241.36.78%motif file (matrix) svg
57 C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-2-5.667e+000.022116.02.13%465.50.97%motif file (matrix) svg
58 G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-2-5.292e+000.031623.03.06%802.51.68%motif file (matrix) svg
59 C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-5.054e+000.039419.02.53%632.21.32%motif file (matrix) svg
60 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-2-5.045e+000.0394139.018.51%7221.915.12%motif file (matrix) svg
61 T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer1e-2-4.905e+000.04424.00.53%48.90.10%motif file (matrix) svg
62 C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer1e-2-4.838e+000.046539.05.19%1639.03.43%motif file (matrix) svg
63 A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-4.765e+000.049278.010.39%3769.87.89%motif file (matrix) svg
64 A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-2-4.707e+000.05148.01.07%182.90.38%motif file (matrix) svg
65 T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C GFY(?)/Promoter/Homer1e-2-4.638e+000.05426.00.80%113.40.24%motif file (matrix) svg
66 A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer1e-2-4.635e+000.054236.04.79%1505.23.15%motif file (matrix) svg
67 G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-2-4.629e+000.054231.04.13%1249.62.62%motif file (matrix) svg