Homer de novo Motif Results (hs_ColorectalCarcinoma_HCT116_Cancer_SMARCA4_SRX1123964_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 807
Total background sequences = 46961
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T G A A T G C C G A T T G C A A C G T A C T G C G T A T A C G G A C T A G T C G T C A A G C T G A T C T C A G G A C T A G C T 1e-313-7.221e+0237.55%1.65%23.3bp (33.5bp)Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer(0.990)
More Information | Similar Motifs Found
motif file (matrix)
2 T C A G G T A C C G T A A C G T A C G T A G T C A G T C C G T A A C T G G A C T 1e-24-5.646e+0112.52%3.79%26.7bp (29.9bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.933)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G 1e-15-3.514e+011.24%0.02%26.2bp (24.1bp)PH0158.1_Rhox11_2/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
4 G A C T C G A T C T G A C T G A G A T C A G T C G T C A T G A C G T C A C T A G 1e-13-3.158e+015.20%1.23%24.2bp (29.5bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.917)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G C G T A A C T G A C T G A T G C A C G T C T A G A C G T A C T G C G T A A G T C C G A T C T G A 1e-11-2.686e+010.74%0.01%29.3bp (11.7bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.576)
More Information | Similar Motifs Found
motif file (matrix)
6 * C G T A A G T C A C G T C A T G A C G T C G T A C G T A C G T A A C T G A C T G A T G C C G T A A C T G 1e-11-2.664e+010.99%0.02%19.7bp (15.9bp)TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A T G C A T G C C G T A A T C G G T A C C G T A A C G T A C T G C G T A A G T C C G A T C G T A 1e-10-2.514e+010.62%0.00%22.5bp (4.9bp)PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer(0.554)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G A C T G C T G A G A C T A C T G C G A T A C T G A C T G C T G A C G T A C T G A A G T C A G T C 1e-10-2.514e+010.62%0.00%20.9bp (2.3bp)ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer(0.681)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A C G T A T C G C G A T A G T C C G T A C G T A A C T G T C G A G T A C A C G T A C G T A C G T A C G T A G T C A C G T 1e-10-2.514e+010.62%0.00%20.4bp (0.0bp)PB0136.1_IRC900814_2/Jaspar(0.582)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G A T C G A T C T G A C T G A A C G T A G T C C G T A A T C G A G T C A G T C A C G T A C T G A G T C 1e-10-2.444e+010.74%0.01%16.8bp (20.9bp)PH0016.1_Cux1_1/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A C T G A C G T A C G T A G T C C G T A C G T A C G T A C G T A A G T C G T A C C G T A A G T C 1e-10-2.444e+010.74%0.01%25.1bp (12.5bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.637)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A C G T A A G C T A G T C C G A T A C G T A C T G A C G T A C T G T A C G 1e-10-2.341e+011.61%0.13%24.3bp (28.1bp)MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer(0.669)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C C G T A C A G T C G T A A C T G A T C G C G T A A C G T C G T A C G T A A C G T A G T C C G T A 1e-9-2.169e+010.62%0.01%17.1bp (11.1bp)PH0017.1_Cux1_2/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A C G T A G T C A G T C C G T A A C G T C G T A C G T A C G T A C G A T A T C G A G T C C G T A C G T A C G T A A G T C 1e-9-2.169e+010.62%0.00%18.0bp (5.3bp)PB0078.1_Srf_1/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
15 * A T G C C G T A T A C G C G T A C G A T A T C G G T C A T G C A C G T A C T A G 1e-9-2.116e+013.10%0.67%25.3bp (33.4bp)Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer(0.826)
More Information | Similar Motifs Found
motif file (matrix)
16 * G C A T G C T A G C T A T A G C C G T A C T A G T A C G C G A T C G A T G C T A 1e-8-1.977e+011.49%0.14%27.2bp (29.9bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.805)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C 1e-6-1.509e+010.50%0.01%26.2bp (23.0bp)Arid3b/MA0601.1/Jaspar(0.812)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C G T A G T C G A C T A G C T A G C T A T G C A G T C G A T C A G C T C G A T 1e-5-1.208e+0110.29%6.19%26.2bp (27.0bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.641)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G C T A C G T A G C T A G C T A C G T A G C T A G C T A G C T A G C T A G C T A C G T A C G T A C G T A C G T C A G T C G A T 1e-3-8.583e+000.99%0.19%24.8bp (18.6bp)PB0182.1_Srf_2/Jaspar(0.765)
More Information | Similar Motifs Found
motif file (matrix)