Information for 14-ATTAATATAC (Motif 17)

C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T C G T A A C G T A C G T C G T A C G T A A C G T
p-value:1e-6
log p-value:-1.509e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 26.2bp
Average Position of motif in Background52.3 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATATAC
NTAATTAATAT--
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATTAATATAC
ATGMATATDC
 C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ATTAATATAC-
NNTATANATATACN
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTAATATAC
ATGAATATTC
 C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------ATTAATATAC
ACCGGCAATTAATAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:6
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------ATTAATATAC
CNNANTAATTAATTNNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTAATATAC-----
ATGAATATTCATGAG
 C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:8
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------ATTAATATAC
CNNAGTAATTAATTNNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTAATATAC-
AATATTAATAAAGA
 A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------ATTAATATAC
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A C G T C G T A A G T C
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T