Information for 2-TTTACAGCTCAGG (Motif 3)

A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
Reverse Opposite:
G T A C A G T C A C G T C A T G C G T A A T C G A T G C C G A T A C T G A C G T C G T A C T G A C G T A
p-value:1e-15
log p-value:-3.514e+01
Information Content per bp:1.843
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.2 +/- 26.2bp
Average Position of motif in Background47.2 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGCTCAGG
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGCTCAGG
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGCTCAGG
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTACAGCTCAGG
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCTCAGG
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCTCAGG
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCTCAGG
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCTCAGG
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCTCAGG
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCTCAGG
DGWTTTATGRCN----
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A G T A C C G T A A T C G A T G C A C G T G A T C C G T A A C T G C A T G
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T A C G T