Homer de novo Motif Results (hs_ColonAdenocarcinoma_LoVo_cancer_HOXA5_SRX359893_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 884
Total background sequences = 48182
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C A T A C T G C T G A T A G C C G A T G T A C T C G A C A T G T G A C T A C G 1e-17-4.136e+019.95%3.40%26.1bp (28.3bp)FOS::JUN/MA0099.2/Jaspar(0.956)
More Information | Similar Motifs Found
motif file (matrix)
2 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G 1e-15-3.656e+010.79%0.00%25.8bp (13.7bp)MEIS2/MA0774.1/Jaspar(0.585)
More Information | Similar Motifs Found
motif file (matrix)
3 C G T A T G C A A C T G A C T G A C T G C G A T A C G T C A T G C T G A A C T G C A G T A G C T C T A G 1e-12-2.854e+012.04%0.19%22.9bp (28.0bp)KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer(0.619)
More Information | Similar Motifs Found
motif file (matrix)
4 T A G C T C G A C T A G A T G C G A T C T G C A A T G C T C G A A T G C A G T C A T G C A G T C C T G A 1e-12-2.766e+012.49%0.34%21.6bp (23.3bp)KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer(0.795)
More Information | Similar Motifs Found
motif file (matrix)
5 * A G T C A C G T A G C T A G T C C T G A A G C T A C G T A C T G A T G C A T C G 1e-11-2.736e+011.70%0.13%28.6bp (28.4bp)POL008.1_DCE_S_I/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T G T A C C T G A A G T C A C G T A C G T G T A C A G T C A C T G A T C G 1e-10-2.529e+012.38%0.34%25.2bp (31.5bp)Gabpa/MA0062.2/Jaspar(0.910)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A C G T A T C G C T G A C T G A A C T G G T A C G T C A C A G T G T A C C T G A A C T G A G T C A G C T G A T C A G T C 1e-10-2.409e+010.79%0.01%27.0bp (22.2bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.551)
More Information | Similar Motifs Found
motif file (matrix)
8 * G C T A A G C T A C G T A G T C G T A C A C T G A G T C A G T C G T A C A G T C A G T C C G T A A C G T A G T C G C T A A T C G 1e-10-2.404e+010.68%0.01%26.8bp (34.4bp)PB0076.1_Sp4_1/Jaspar(0.747)
More Information | Similar Motifs Found
motif file (matrix)
9 * G C A T A C G T C T A G C T A G C G T A A T C G G T C A C G T A A C T G A T C G C T G A G T A C A C G T 1e-10-2.347e+013.51%0.84%25.8bp (25.0bp)ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer(0.647)
More Information | Similar Motifs Found
motif file (matrix)
10 * G T A C A G C T C G T A A T C G T G C A A T G C T C G A G T C A G T C A G A T C 1e-10-2.326e+012.04%0.27%26.5bp (27.6bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.688)
More Information | Similar Motifs Found
motif file (matrix)
11 * A T G C A G T C T C G A T C A G A T C G A C T G A C T G A C T G A G T C C T A G A G T C A C G T A T G C C A T G G A T C A C G T 1e-9-2.233e+010.68%0.01%21.3bp (29.2bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.620)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C T G C G T A A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G C T A G C A T G A G C T 1e-9-2.162e+011.13%0.06%16.9bp (22.6bp)PB0126.1_Gata5_2/Jaspar(0.550)
More Information | Similar Motifs Found
motif file (matrix)
13 * G T A C G A C T C G T A A C G T A C T G A T G C G T C A C G T A A C T G A T G C 1e-8-2.048e+011.36%0.12%26.7bp (26.9bp)Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer(0.624)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G A G C T A T C G G C A T A T C G G C T A C A T G A T C G C A T G T A C G 1e-8-2.036e+013.17%0.79%22.7bp (26.4bp)Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer(0.565)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C 1e-8-1.993e+010.68%0.01%29.3bp (32.3bp)RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer(0.602)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T A C G T A C A G T C G A T C A T G C A G C T G T A C A G T C G A C T A G C T A G T C A G T C A T G C 1e-8-1.984e+019.84%4.99%24.9bp (27.0bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
17 * A G C T C G A T G T A C C G T A C T G A C G T A G T A C A T C G A C G T G A C T A C G T A C T G C T G A 1e-8-1.843e+011.02%0.07%22.0bp (29.1bp)TBX21/MA0690.1/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C G T A G T C A G T C A G T C A C T G A C G T C G T A A G T C A C T G A G T C A C T G A G T C A C G T 1e-7-1.644e+010.45%0.00%29.2bp (33.7bp)Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer(0.578)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T C G T A A C T G C G T A A C T G C G T A A C T G C T A G A C G T C G T A 1e-6-1.592e+010.57%0.01%23.1bp (27.0bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
20 * A T G C A G C T G T A C A G T C C G A T A G T C A C G T A T G C T A C G A T C G A T C G A T G C T C G A C T A G A T C G T C G A 1e-6-1.587e+010.68%0.03%26.8bp (22.2bp)ZNF354C/MA0130.1/Jaspar(0.566)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C G T A G T C G C A T A G T C A T G C A C T G A C T G C G T A A T C G C G T A 1e-6-1.515e+011.47%0.23%27.1bp (28.8bp)GFX(?)/Promoter/Homer(0.705)
More Information | Similar Motifs Found
motif file (matrix)
22 * T A C G A C G T A G T C C G T A A G T C A T C G A C G T A C T G C T G A A G T C A C T G G T A C T A C G 1e-6-1.412e+011.02%0.11%23.1bp (33.1bp)BHLHE41/MA0636.1/Jaspar(0.917)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G A T C G C G A T G T C A T A C G C G T A C T A G A C T G A C T G A T C G 1e-5-1.356e+012.04%0.51%28.8bp (24.5bp)Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer(0.688)
More Information | Similar Motifs Found
motif file (matrix)
24 * G T C A G T A C T G C A A G T C C T G A A G T C C T G A A G T C C T G A A T G C T C G A A G C T T C A G 1e-5-1.340e+012.04%0.52%27.7bp (28.1bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.741)
More Information | Similar Motifs Found
motif file (matrix)