Information for 1-HGCCGGCTTGGCAGCG (Motif 2)

G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
Reverse Opposite:
G T A C T A C G A G T C C G A T A C T G A G T C A G T C G T C A G T C A A C T G A G T C A T G C C T A G A C T G A T G C C G T A
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.746
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.6 +/- 25.8bp
Average Position of motif in Background23.2 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.58
Offset:7
Orientation:forward strand
Alignment:HGCCGGCTTGGCAGCG
-------TTGACAGC-
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG
---NTGATTGACAGN-
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG----
----GGATTGACAGGTCNTT
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG
---------CACAGN-
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG
---BTGABTGACAGS-
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG----
----GTATTGACAGCTNNTT
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG
TGCCCNNAGGGCA---
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:HGCCGGCTTGGCAGCG
-------TTGACAGG-
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG----
----GTATTGACAGGTNNTT
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:HGCCGGCTTGGCAGCG
TGCCCTNAGGGCA---
 G A C T A T C G A G T C A G T C A T C G A C T G G T A C A C G T A C G T C T A G C T A G A G T C C G T A A C T G A T G C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T