Information for 6-CCACAGCAGCCTC (Motif 15)

A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.953
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 29.3bp
Average Position of motif in Background48.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGCAGCCTC
AAACCACAGC------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGCAGCCTC
AAACCACAGAN-----
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCACAGCAGCCTC
-CACAGN------
 A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACAGCAGCCTC
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCACAGCAGCCTC
-AGCAGCTGCTNN
 A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCACAGCAGCCTC
-CACAGCAGGGGG
 A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCACAGCAGCCTC-
ATGTACAGTAGCAAAG
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACAGCAGCCTC
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCACAGCAGCCTC
-CGCAGCTGCG--
 A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCACAGCAGCCTC
GAGCACAGCAGGACA
 A C G T A C G T A G T C A G T C C G T A A G T C G T C A A C T G A G T C G T C A A C T G A G T C A G T C A C G T A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A