NAIK Genome Database

experiment name	hs_cholangiocarcinoma_HuCCT1_cancer_CDK9_SRX1013341	number of peaks	15413
antibody	CDK9
cell line	HUCCT1	Number of reads	28163405
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
SP1	691
E2F1	611
MYCN	588
MYC	574
ZNF740	417
E2F4	409
ZBTB7A	393
EGR1	378
ERG	369
ELK1	340
MAX	337
TAL1::TCF3	331
Gabpa	324
ELF1	321
EGR2	318
TCF4	314
Tcf12	294
NR2F1	293
CTCF	292
TFAP2A-var.2	279
TFAP2A	267
TCF3	267
ETS1	249
Esrrg	240
TFAP2C	239
ZEB1	234
KLF4	217
NRF1	213
KLF5	213
MAX::MYC	204
FOS	192
E2F6	187
ETV1	185
ELK4	176
STAT3	175
TFDP1	174
YY1	174
RUNX1	168
ZNF263	165
MYBL1	163
TEAD4	158
FOSL2	158
USF1	157
NFIC	152
BHLHE40	150
JUND	149
BHLHE41	146
USF2	142
Sox2	141
Ar	140
NFKB1	135
ERF	133
FOSL1	133
Esrra	132
TEAD1	131
BATF::JUN	128
ELK3	124
SP3	119
HEY1	112
TFAP2A-var.3	110
FOS::JUN	108
FLI1	107
JUN	106
E2F3	105
Klf1	104
EBF1	102
Atf3	99
PBX1	98
ETV6	94
ETV3	91
Hnf4a	89
KLF9	89
STAT1::STAT2	87
REL	86
FOXA1	86
Gata1	85
SPI1	84
Tcf21	84
RUNX3	82
NFATC3	82
SOX9	82
Rxra	81
THAP1	79
RELA	78
Arnt	77
ELF3	75
Atf1	73
SP2	72
NR1H2::RXRA	71
CREB1	70
NFKB2	66
SP4	66
GATA3	65
Pparg::Rxra	64
NEUROD1	64
Foxa2	64
EGR4	63
PAX5	61
TFAP4	60
Gata4	60
FEV	59
GATA2	59
CEBPB	58
ARNT::HIF1A	56
SMAD2::SMAD3::SMAD4	56
SNAI2	54
TP63	52
Hand1::Tcf3	52
GATA5	52
OTX2	51
CEBPA	50
NFYB	49
POU5F1B	49
XBP1	48
RUNX2	47
NFIA	47
NFE2	46
NR4A2	46
NFYA	45
Nfe2l2	40
CEBPD	39
MAF::NFE2	37
TCF7L2	36
JUNB	35
RARA::RXRA	35
MYB	35
HINFP	34
HSF1	34
BATF3	33
MAFF	32
GMEB2	32
Ahr::Arnt	31
EGR3	31
GATA1::TAL1	30
MAFK	29
TEAD2	27
ZNF143	27
HNF4G	26
NKX3-2	26
Tcf7	26
Mafb	25
ZBTB33	24
STAT1	24
NR3C2	23
Bach1::Mafk	23
Nr1h3::Rxra	23
Foxj2	22
ETV4	21
MAFG	21
Foxo1	20
KLF13	20
Gmeb1	18
Stat5a::Stat5b	18
Hic1;	18
Arntl	18
Gfi1b	16
Pou5f1::Sox2	15
NFIL3	15
PRDM1	15
Dux	15
TBX1	14
BCL6B	14
CREB3L1	14
EOMES	14
Bcl6	13
FOXP1	13
DUX4	12
REST	12
SREBF1	11
FOXH1	11
SPIB	11
TP53	11
PDX1	11
NFATC1	11
Ddit3::Cebpa	10
IRF1	10
SCRT1	10
MEF2B	10
ATF4	10
TP73	8
SREBF2	8
ELF5	8
RXRB	8
Arid3a	8
RXRG	8
NR2C2	8
Ascl2	7
Vdr	7
CLOCK	7
MAFG::NFE2L1	6
Rarb	6
FOXP3	6
POU2F2	6
RFX5	6
Rarg	6
RORA	5
CDX2	5
MYBL2	5
GRHL1	5
Nkx3-1	5
Mecom	5
MEF2A	4
Sox17	4
RORA(var.2)	4
RXRA::VDR	4
TBX19	4
GLI2	4
PROX1	4
NR3C1	3
SRF	3
Hes1	3
ZBTB18	3
CREB3	3
Creb3l2	2
Id2	2
Nr5a2	2
BARX1	2
HES5	2
MIXL1	1
Pax6	1
NKX2-3	1
LEF1	1
RFX2	1
MEF2D	1
HOXA13	1
FOS::JUND	1
HNF1B	1
Hoxa11	1
Tcfl5	1
HOXA5	1
E2F8	1
PPARG	1
Rfx1	1
Nkx2-5-var.2	1
TFE3	1
SMAD3	1
Srebf1(var.2)	1
Klf12	1