NAIK Genome Database

experiment name	hs_CervixCarcinoma_HeLa_undef_TRAP_SRX1589765	number of peaks	65918
antibody	TRAP
cell line	HELA	Number of reads	56915478
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
SP1	1124
MYCN	835
ERG	796
NR2F1	788
ZNF740	783
FOXA1	780
E2F1	770
MAX	763
Sox2	763
MYC	757
TFAP2A	676
Esrrg	631
TAL1::TCF3	573
E2F4	548
TFAP2A-var.2	540
ZBTB7A	524
EGR1	518
Gabpa	509
Ar	499
RUNX1	496
ELF1	491
TCF3	482
TCF4	477
Foxa2	475
TFAP2C	449
Tcf12	430
GATA3	422
Gata1	407
STAT3	407
MAX::MYC	405
NFIC	390
MYBL1	377
SPI1	355
GATA2	352
ELK1	344
Gata4	344
Esrra	332
YY1	328
ZEB1	318
CTCF	314
Hnf4a	312
FOS	291
Rxra	284
USF1	281
ETS1	280
KLF4	279
E2F6	279
EGR2	273
KLF5	266
NFKB1	264
USF2	255
TEAD4	253
EBF1	252
CEBPB	250
NRF1	249
SP3	240
SOX9	239
RUNX3	233
REL	233
Pparg::Rxra	231
OTX2	230
ZNF263	228
HEY1	226
ELF3	224
BHLHE40	222
PBX1	220
TFDP1	213
TFAP2A-var.3	204
GATA5	199
STAT1::STAT2	199
FLI1	197
NFYA	196
RELA	196
ETV1	191
NR1H2::RXRA	190
NFYB	187
Klf1	176
TFAP4	174
BHLHE41	174
SP2	170
TCF7L2	168
Tcf7	158
TEAD1	156
BATF::JUN	156
ELK4	154
JUND	150
TP63	148
NEUROD1	143
ETV6	141
FOSL2	140
KLF9	138
Tcf21	131
POU5F1B	129
Pou5f1::Sox2	126
ELK3	126
Dux	122
GATA1::TAL1	120
NFKB2	117
Arnt	116
ERF	108
NR3C2	108
HSF1	107
Hand1::Tcf3	106
SP4	104
DUX4	102
MAFK	102
FOSL1	99
CEBPA	98
SMAD2::SMAD3::SMAD4	98
MYB	98
JUN	95
FOS::JUN	93
NFIA	93
FEV	87
MEF2B	87
ETV3	86
E2F3	86
HNF4G	86
Stat5a::Stat5b	84
ARNT::HIF1A	83
Foxo1	83
NFATC3	81
PAX5	80
CREB1	79
THAP1	77
Atf1	77
RUNX2	73
Arid3a	73
MAF::NFE2	73
Mafb	71
Foxj2	69
CEBPD	68
Atf3	67
PRDM1	64
CDX2	64
EOMES	63
Nfe2l2	62
BCL6B	58
NR4A2	56
SNAI2	56
NFE2	55
EGR4	55
RARA::RXRA	55
NKX3-2	55
IRF1	54
MAFG	51
MAFF	51
Bcl6	51
STAT1	51
SPIB	46
MYBL2	45
Ahr::Arnt	44
Nr1h3::Rxra	44
Gfi1b	44
Bach1::Mafk	44
ZNF143	42
SRF	42
TP73	40
PDX1	40
FOXP1	38
Nkx3-1	36
HINFP	35
ATF4	33
Gmeb1	33
SCRT1	31
XBP1	31
RXRB	30
GMEB2	30
RXRG	30
HNF1B	30
Arntl	30
MEF2A	29
TP53	29
TBX1	27
Hic1;	27
TEAD2	27
Vdr	25
Sox17	24
BATF3	23
POU2F2	22
NFATC1	22
ETV4	22
NR3C1	22
REST	19
ZBTB33	19
FOXH1	18
EGR3	18
Srebf1(var.2)	17
KLF13	17
CREB3L1	17
JUNB	17
NR2C2	17
Mecom	16
GLI2	15
Rarg	15
GRHL1	14
Ddit3::Cebpa	14
FOXP3	13
NFIL3	12
PPARG	12
Rarb	11
MAFG::NFE2L1	11
ZBTB18	11
BARX1	11
RORA(var.2)	10
ELF5	10
RXRA::VDR	9
CLOCK	9
SREBF1	8
RFX5	8
MEIS1	8
HNF1A	8
MEF2D	7
CREB3	6
SMAD3	6
SREBF2	6
Nr5a2	6
TBX19	6
Creb3l2	4
LEF1	4
Arx	4
RARA	4
Id2	4
HSF2	4
MIXL1	4
Ascl2	3
Hoxa11	3
HOXA13	3
IRF9	3
RFX2	2
FOS::JUNB	2
Pitx1	2
Pax6	2
NKX2-3	2
PROX1	2
HES5	2
NFAT5	1
Tcfl5	1
Rfx1	1
ISX	1
MTF1	1
TBP	1
E2F2	1
RORA	1
Myod1	1
Stat4	1
Hoxa9	1
TFE3	1
Klf12	1
HOXA5	1
FOXO4	1
Hes2	1
FOS::JUND	1
Alx4	1
FOS::JUN(var.2)	1
TFEB	1

Motif name

Number of overlap

1124

835

796

788

783