NAIK Genome Database

experiment name	hs_ProstateCancer_VCaP_cancer_HDAC3_SRX059713	number of peaks	19256
antibody	HDAC3
cell line	VCAP	Number of reads	24557110
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
FOXA1	4891
Foxa2	3412
ERG	2182
Esrrg	1982
Ar	1777
Gabpa	1177
GATA3	1072
Nkx3-1	998
NR2F1	984
NKX3-2	856
NFIC	729
ELF1	694
Gata4	676
Esrra	643
SP1	612
MYC	607
MYCN	556
GATA5	551
Tcf12	544
CDX2	505
GATA2	495
Sox2	458
Gata1	457
MAX	453
TAL1::TCF3	450
ERF	438
TFAP2A	416
ZBTB7A	403
MYBL2	398
TFAP2C	393
TCF4	390
E2F1	387
TCF3	378
ELF3	366
EGR2	362
BHLHE41	361
Hnf4a	361
ZNF740	352
ETS1	344
STAT3	328
FOS	324
Foxj2	322
TEAD4	322
EGR1	317
Foxo1	275
ZEB1	271
TFAP2A-var.2	268
Rxra	266
TEAD1	263
NFIA	262
ETV1	262
RUNX1	258
ELK1	257
NR1H2::RXRA	252
NR3C2	250
FOSL2	238
FLI1	238
MAX::MYC	236
MYBL1	236
Pparg::Rxra	224
TCF7L2	217
PBX1	209
SPI1	206
CEBPB	204
SOX9	199
KLF4	199
BATF::JUN	196
Tcf7	195
E2F4	195
FOXP1	180
CTCF	174
TP63	173
KLF5	170
JUND	170
FOSL1	169
NFKB1	163
JUN	156
USF1	154
USF2	148
BHLHE40	144
GRHL1	143
Arnt	140
HEY1	140
NRF1	136
ETV3	135
TFAP2A-var.3	135
ELK4	133
GATA1::TAL1	132
EBF1	128
Atf3	128
Tcf21	125
FOS::JUN	123
CEBPA	122
NEUROD1	122
Mafb	119
ETV6	117
REL	112
ZNF263	111
RELA	110
HNF4G	110
YY1	109
Nr1h3::Rxra	106
TFAP4	103
HNF1B	100
POU5F1B	98
ARNT::HIF1A	97
PDX1	97
OTX2	91
Ahr::Arnt	90
RUNX3	90
Arid3a	90
SP3	89
CREB1	88
E2F6	87
Klf1	85
STAT1::STAT2	83
PAX5	82
MAFK	82
SMAD2::SMAD3::SMAD4	78
ETV4	77
TFDP1	74
ELK3	73
CEBPD	72
NFKB2	70
MEF2B	70
RARA::RXRA	69
NFIL3	67
Hand1::Tcf3	66
KLF9	61
EGR4	61
FEV	59
HSF1	54
MAFF	53
NR3C1	51
Pou5f1::Sox2	49
BCL6B	48
Mecom	47
RUNX2	47
Bcl6	47
MAF::NFE2	43
THAP1	43
NFE2	42
Atf1	41
NFATC3	40
Nfe2l2	40
MEF2A	37
Stat5a::Stat5b	37
BATF3	36
RXRB	34
HNF1A	33
ATF4	32
SNAI2	32
JUNB	32
SP2	32
Dux	31
TP73	31
STAT1	31
RXRG	30
FOXP3	29
Sox17	29
MAFG	28
NR4A2	28
PRDM1	28
Vdr	28
ZNF143	27
DUX4	27
Gfi1b	26
EOMES	25
XBP1	25
ELF5	24
E2F3	23
MYB	22
HOXA13	22
SP4	22
TEAD2	22
NFATC1	21
HINFP	21
RFX5	21
Ddit3::Cebpa	20
NFYB	20
SPIB	19
Hic1;	19
EGR3	18
Gmeb1	18
FOXH1	18
Nr5a2	17
IRF1	17
TBX1	17
SRF	16
TP53	16
Arntl	16
NR2C2	16
SCRT1	15
Bach1::Mafk	14
CREB3L1	14
RORA(var.2)	13
TBX19	13
Pax6	13
Srebf1(var.2)	13
NFYA	12
POU2F2	12
RXRA::VDR	10
GMEB2	9
MEF2D	9
REST	8
KLF13	8
SREBF1	8
FOXO4	8
BARX1	7
ZBTB33	6
Ascl2	6
ZBTB18	6
SMAD3	6
Rarg	6
CLOCK	4
MEIS1	4
LEF1	4
CREB3	4
SREBF2	4
PPARG	3
NFIC::TLX1	3
MAFG::NFE2L1	3
HSF2	2
PROX1	2
GLI2	2
FOS::JUND	2
Arx	2
SREBF2(var.2)	2
Rfx1	2
FOS::JUNB	2
RORA	2
ISX	1
E2F8	1
Pitx1	1
Stat4	1
HOXA5	1
Tcfl5	1
RFX2	1
Klf12	1
TFE3	1
Alx4	1
Hoxa11	1
RARA	1
HOXB13	1
MIXL1	1
Hes1	1
NKX2-3	1
Rarb	1
FOS::JUN(var.2)	1

Motif name

Number of overlap

4891

3412

2182

1982

1777

Gabpa