NAIK Genome Database

experiment name	hs_LungCarcinoma_HCC95_cancer_SOX2_SRX277137	number of peaks	5750
antibody	SOX2	link to motif view if antibody and consensus motif is the same
cell line	HCC95	Number of reads	21218169
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
Sox2	2939
FOS	468
TP63	427
FOSL2	307
BATF::JUN	300
FOXA1	291
JUND	291
FOSL1	261
FOS::JUN	240
JUN	237
Foxa2	197
NFIC	196
ERG	190
SOX9	189
RUNX1	188
TEAD4	184
PBX1	178
Atf3	178
SP1	165
TEAD1	158
STAT3	152
CEBPB	145
MYC	135
Ar	133
MYCN	133
GATA3	128
Esrrg	126
TFAP2A	120
Pou5f1::Sox2	118
Tcf12	118
Sox17	116
KLF4	115
MAX	115
Gata4	113
Gabpa	108
TAL1::TCF3	105
OTX2	104
ELF1	100
TCF7L2	100
KLF5	99
ZNF740	96
E2F1	94
TP73	94
POU5F1B	91
E2F4	90
TCF4	90
TCF3	89
GATA5	86
NR2F1	86
TFAP2C	84
CEBPA	84
NFE2	78
YY1	77
GATA2	76
Nfe2l2	75
Tcf7	74
MYBL1	73
Esrra	71
MAX::MYC	69
EGR1	69
TP53	68
JUNB	68
ELK1	68
RUNX3	64
CDX2	63
NFIA	62
Gata1	61
ETS1	60
BHLHE41	59
CTCF	59
EGR2	59
MAF::NFE2	59
ZBTB7A	58
TFAP2A-var.2	56
Pparg::Rxra	56
ZEB1	56
Foxj2	53
Hnf4a	53
SPI1	48
NRF1	48
ELF3	46
USF2	46
ELK4	45
NFYB	45
NR1H2::RXRA	44
MAFK	44
CEBPD	44
ETV1	43
NFYA	43
MAFG	43
Foxo1	43
CREB1	42
MAFF	42
Bach1::Mafk	41
Rxra	40
NFKB1	39
SMAD2::SMAD3::SMAD4	39
RUNX2	38
FLI1	36
Tcf21	36
TFDP1	36
Klf1	35
USF1	34
SP3	34
ETV6	33
Atf1	33
KLF9	31
PAX5	31
BHLHE40	31
PDX1	31
MEF2B	31
GATA1::TAL1	30
NKX3-2	30
REL	29
Mafb	29
EBF1	28
NEUROD1	28
ATF4	28
ERF	28
TFAP4	28
ELK3	27
BATF3	26
ETV3	26
GRHL1	26
Arnt	26
E2F6	26
RELA	26
ZNF263	26
FOXP1	24
SP2	22
Arid3a	21
NR3C2	21
SP4	20
HSF1	20
MYBL2	20
HNF1B	19
HEY1	19
STAT1::STAT2	19
Stat5a::Stat5b	18
TFAP2A-var.3	18
NFIL3	18
NFKB2	18
EOMES	18
Nkx3-1	17
Hand1::Tcf3	17
PRDM1	16
THAP1	16
Ddit3::Cebpa	15
Ahr::Arnt	15
MEF2A	14
ARNT::HIF1A	14
Gfi1b	13
NR4A2	12
NFATC3	12
FEV	12
EGR4	12
POU2F2	12
HNF4G	12
ETV4	12
Dux	11
XBP1	11
MYB	11
E2F3	11
ZNF143	10
SRF	10
STAT1	9
Nr1h3::Rxra	9
Mecom	8
Vdr	8
SCRT1	7
MEF2D	7
TEAD2	7
MAFG::NFE2L1	7
Gmeb1	7
RARA::RXRA	6
FOXH1	6
Arntl	6
EGR3	6
ZBTB33	5
NFATC1	5
MEIS1	5
FOS::JUNB	5
SPIB	5
HINFP	4
FOS::JUND	4
RFX5	4
TBX1	4
KLF13	4
LEF1	4
IRF1	4
NR2C2	3
Bcl6	3
FOXP3	3
CREB3L1	3
HNF1A	3
RORA(var.2)	3
BARX1	3
SNAI2	3
GMEB2	3
BCL6B	3
SREBF2	3
NR3C1	3
REST	3
Hic1;	2
RXRG	2
ZBTB18	2
RFX2	2
RXRA::VDR	2
CREB3	2
DUX4	2
TBX19	2
Rarb	2
Srebf1(var.2)	2
RXRB	2
Rarg	2
FOXO4	1
Arx	1
Pax6	1
Nr5a2	1
HOXA13	1
FOSB::JUN	1
PPARG	1
Stat4	1
PROX1	1
NFAT5	1
FOS::JUN(var.2)	1
ELF5	1
TFE3	1
SREBF1	1
Sox1	1
CLOCK	1
NFIC::TLX1	1