Homer de novo Motif Results (hs_LungCarcinoma_HCC95_cancer_SOX2_SRX277137_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 777
Total background sequences = 46962
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T C G A G T C G A T C C G T A A C G T A C G T T C A G C G A T A C G T G A T C 1e-182-4.198e+0253.80%11.35%22.7bp (33.1bp)Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer(0.972)
More Information | Similar Motifs Found		motif file (matrix)
2 C T A G C G T A T A C G C T A G T C A G A C G T A C T G C G T A C A T G A C G T A G T C C G T A A G C T 1e-31-7.303e+018.11%1.17%21.1bp (26.5bp)Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer(0.951)
More Information | Similar Motifs Found		motif file (matrix)
3 C T A G T G C A C G T A G T C A A C G T G T C A G A T C T G C A C G T A A G C T C A G T A G T C A G T C A G T C C G T A C T A G 1e-18-4.355e+011.16%0.01%15.1bp (26.2bp)GFY(?)/Promoter/Homer(0.803)
More Information | Similar Motifs Found		motif file (matrix)
4 T A G C C A T G G T A C C G A T T C A G T C G A T C G A A C G T C T A G A C T G 1e-17-4.054e+0110.42%3.42%25.1bp (29.0bp)POL004.1_CCAAT-box/Jaspar(0.702)
More Information | Similar Motifs Found		motif file (matrix)
5 A C G T A T C G G C A T G A C T A T G C C G A T A T C G T C G A A T G C G C T A C G A T T A C G T A G C 1e-14-3.244e+010.90%0.01%23.5bp (19.5bp)PB0120.1_Foxj1_2/Jaspar(0.736)
More Information | Similar Motifs Found		motif file (matrix)
6 A G T C G C T A C T A G C T A G A T C G T A C G G T C A C G A T A C G T G T C A C G T A G A C T G T C A 1e-13-3.178e+011.42%0.04%23.2bp (28.1bp)PH0129.1_Otx1/Jaspar(0.751)
More Information | Similar Motifs Found		motif file (matrix)
7 C G T A A G T C C G T A C G T A A C T G G A C T G T A C C G T A A C T G G T A C C G T A A G T C C G T A 1e-13-3.122e+010.77%0.00%23.8bp (16.4bp)Nr2e1/MA0676.1/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)
8 C A G T A G T C G T A C G T A C G T A C T A G C C T G A A T G C G A T C G A C T A T C G G A C T A G T C 1e-12-2.954e+012.06%0.15%15.6bp (23.7bp)ZEB1/MA0103.2/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
9 C A T G T A G C G T C A C A T G C T A G A T G C A G C T C G A T C T G A C A T G A T C G G T A C C G T A 1e-12-2.849e+012.70%0.33%22.9bp (31.2bp)p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer(0.691)
More Information | Similar Motifs Found		motif file (matrix)
10 T A G C T A G C A G T C C G T A A T G C C G T A G T C A C T G A T A C G G T C A G T A C G C T A G T A C A G T C C T G A T A C G 1e-12-2.837e+011.93%0.13%23.1bp (28.4bp)Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer(0.603)
More Information | Similar Motifs Found		motif file (matrix)
11 * G T A C A C G T G T A C A C G T A C G T A C G T A G T C A C G T A G C T T A G C A G C T A C G T A C G T 1e-11-2.687e+011.16%0.03%14.7bp (26.1bp)PB0148.1_Mtf1_2/Jaspar(0.704)
More Information | Similar Motifs Found		motif file (matrix)
12 * C G T A A C T G A C T G G T A C C T A G A C G T C T A G A C T G G T A C A C G T 1e-11-2.547e+011.80%0.14%23.3bp (26.2bp)PB0180.1_Sp4_2/Jaspar(0.864)
More Information | Similar Motifs Found		motif file (matrix)
13 * C T G A C G T A A G T C G A T C C T A G A C T G A G C T A C G T A C G T T A C G 1e-10-2.438e+016.18%2.03%26.3bp (30.5bp)TFCP2/MA0145.3/Jaspar(0.913)
More Information | Similar Motifs Found		motif file (matrix)
14 * C G T A G A C T G A C T C G T A G C A T A C G T A G C T C G T A A T C G C G T A A T C G T A G C A G C T A G T C A G C T T G A C 1e-10-2.401e+011.16%0.04%20.3bp (25.3bp)PH0104.1_Meis2/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
15 * A G T C G A T C G C T A G A T C C G T A A T C G A T G C C G A T A C T G A C G T C A T G A C T G C G A T 1e-9-2.188e+011.16%0.05%26.2bp (37.3bp)Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer(0.741)
More Information | Similar Motifs Found		motif file (matrix)
16 * T C G A G T C A C T G A C T A G A T G C G C T A C G A T C A G T C T A G G A T C G A C T C G A T A C T G C G A T A G C T A C G T 1e-9-2.162e+010.77%0.01%23.9bp (25.0bp)Foxd3/MA0041.1/Jaspar(0.601)
More Information | Similar Motifs Found		motif file (matrix)
17 * A C G T C T A G C G T A C G T A C T G A A C T G A C T G A C T G G T C A A T C G 1e-8-2.024e+011.93%0.24%22.9bp (28.6bp)TCF7L2/MA0523.1/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
18 * A G T C A C G T A T C G A C G T A G C T A G T C G T A C A G C T A T G C G T A C A G C T A C T G C G T A A T G C A C G T A T G C 1e-8-1.986e+010.64%0.01%16.0bp (20.1bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.626)
More Information | Similar Motifs Found		motif file (matrix)
19 * G T A C A C G T C G T A C G T A C G A T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C T G 1e-8-1.960e+010.51%0.00%18.7bp (0.0bp)HOXD13/MA0909.1/Jaspar(0.610)
More Information | Similar Motifs Found		motif file (matrix)
20 * C T G A C G T A C G A T A C T G A C T G C G T A C G T A G A C T A G C T A T G C G A T C C G T A C A G T C G A T A T C G C A G T 1e-8-1.920e+011.54%0.15%17.7bp (34.1bp)PB0169.1_Sox15_2/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
21 * G T A C A G T C G T A C A C G T C G T A A G T C G T C A C G T A G T C A G T C A A G T C A G T C A G T C 1e-8-1.843e+010.64%0.01%24.7bp (12.6bp)GFY(?)/Promoter/Homer(0.659)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C G T A C T G A C T G G T A C C G A T T C A G A T C G A C T G A C T G A C T G C G A T A G T C C T A G 1e-8-1.843e+010.64%0.01%21.8bp (22.3bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.596)
More Information | Similar Motifs Found		motif file (matrix)
23 * A T G C A C T G A C G T C T G A A C G T A C G T A C G T A G C T C G T A A C T G 1e-6-1.434e+010.90%0.06%22.4bp (28.6bp)PB0106.1_Arid5a_2/Jaspar(0.731)
More Information | Similar Motifs Found		motif file (matrix)