NAIK Genome Database

experiment name	hs_HepatocellularCarcin_HepG2_Cancer_HNF4A_SRX018625	number of peaks	17470
antibody	HNF4A	link to motif view if antibody and consensus motif is the same
cell line	HEPG2	Number of reads	6840443
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
Hnf4a	7315
HNF4G	3657
NR1H2::RXRA	3107
Rxra	2570
NR2F1	2534
Pparg::Rxra	1739
FOXA1	1281
Foxa2	1196
SP1	853
CEBPA	753
ZBTB7A	681
Esrra	615
CEBPB	598
TEAD4	547
MYCN	544
CEBPD	540
MYC	531
Gabpa	519
MYBL2	508
ELF1	487
Tcf12	462
ZEB1	455
MAX	454
ZNF740	418
FOS	396
NFIC	395
TCF7L2	392
Gata4	392
Tcf7	385
GATA5	366
ERG	360
GATA3	342
FOSL2	335
Ar	320
Gata1	305
Sox2	304
BATF::JUN	294
JUND	286
CTCF	281
MAX::MYC	281
Esrrg	270
Atf3	269
TFAP2A	267
GATA2	264
NFIL3	258
USF1	254
USF2	252
JUN	246
TEAD1	242
TAL1::TCF3	233
Nr1h3::Rxra	227
FOS::JUN	215
HEY1	206
FOSL1	203
TCF4	200
RARA::RXRA	197
NFIA	188
TFAP2C	188
TCF3	183
RUNX1	177
TFAP2A-var.2	173
NR2C2	166
RXRB	164
KLF5	159
BHLHE40	158
SOX9	156
CREB1	154
RXRG	153
EGR1	146
STAT3	143
PBX1	142
EGR2	129
Ddit3::Cebpa	124
ELF3	119
MYBL1	118
Arid3a	114
ETS1	108
CDX2	103
BHLHE41	102
MAFF	100
KLF4	100
FLI1	96
SPI1	96
ELK1	94
E2F1	94
NFKB1	91
E2F4	88
TFAP4	87
HNF1B	86
MAFK	84
ZNF263	83
NFE2	82
OTX2	80
EBF1	79
RELA	78
GATA1::TAL1	78
RUNX3	76
Tcf21	75
REL	74
Nfe2l2	73
Vdr	73
JUNB	72
YY1	71
NR3C2	71
Foxo1	65
ERF	64
TFAP2A-var.3	64
MAF::NFE2	64
NKX3-2	61
FOXP1	59
ATF4	58
TP63	58
NEUROD1	58
REST	57
Foxj2	56
ETV6	50
NRF1	50
ETV1	49
ELK4	48
MAFG	47
Nkx3-1	46
NFKB2	45
Atf1	45
Mafb	44
STAT1::STAT2	44
PDX1	43
RXRA::VDR	42
BATF3	41
Arnt	41
PAX5	41
Klf1	41
SP3	40
RUNX2	39
HNF1A	39
E2F6	36
SMAD2::SMAD3::SMAD4	35
SRF	34
Bach1::Mafk	34
ETV3	32
KLF9	32
TEAD2	31
ARNT::HIF1A	31
Stat5a::Stat5b	30
POU5F1B	28
Mecom	26
Pou5f1::Sox2	26
TFDP1	23
PRDM1	23
ELK3	22
RARA	22
Sox17	22
STAT1	22
THAP1	22
NFYA	22
NR4A2	21
Hand1::Tcf3	21
EOMES	21
MYB	20
Dux	19
MEF2B	18
SP2	18
TP73	18
HSF1	18
ZNF143	17
MEF2A	16
NFYB	16
BCL6B	15
FEV	15
NFATC3	15
Bcl6	15
Ahr::Arnt	14
SPIB	14
XBP1	13
FOXP3	13
IRF1	12
SP4	12
NFATC1	12
Arntl	12
NR3C1	12
EGR4	11
Gmeb1	10
DUX4	10
EGR3	10
LEF1	10
E2F3	9
TBX1	9
ETV4	9
TP53	8
ZBTB18	8
POU2F2	8
FOXH1	8
Rarg	8
GMEB2	8
SCRT1	8
Gfi1b	8
RFX5	8
HINFP	7
Nr5a2	7
GRHL1	7
MAFG::NFE2L1	6
Srebf1(var.2)	6
PPARG	6
ELF5	6
MEIS1	5
Pax6	5
SREBF2	5
BARX1	5
CREB3L1	5
SNAI2	5
ZBTB33	4
FOXO4	4
Ascl2	4
TBX19	4
SREBF1	3
FOS::JUND	3
KLF13	3
NFAT5	3
CLOCK	3
GLI2	3
MEF2D	3
Rarb	3
HOXA5	2
FOS::JUNB	2
DBP	2
TFE3	2
SMAD3	2
RORA(var.2)	2
Hes1	2
HOXA13	1
Id2	1
CREB3	1
Arx	1
Stat4	1
Pitx1	1
Alx4	1
RORA	1
HOXB13	1
FOSB::JUN	1
Sox1	1
TBP	1
Rfx1	1
MIXL1	1
Hic1;	1
HSF2	1

Motif name

Number of overlap

7315

3657

3107

2570

2534