NAIK Genome Database

experiment name	hs_EmbryonicStemCell_hESC_normal_HEB_SRX019200	number of peaks	43800
antibody	HEB
cell line	HESC	Number of reads	12953130
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
Tcf12	9113
CTCF	6509
TCF4	5386
SP1	4713
MYC	4581
TAL1::TCF3	4456
MYCN	4033
Sox2	3788
TCF3	3435
BHLHE41	2750
ZEB1	2727
ZNF740	2283
E2F1	2237
MAX	2047
E2F4	1952
NR2F1	1909
EGR1	1907
Pou5f1::Sox2	1729
ZBTB7A	1712
ERG	1662
Gabpa	1623
NFIC	1558
ELF1	1484
ELK1	1426
TEAD4	1424
TFAP2A-var.2	1411
TFAP2A	1281
NEUROD1	1264
EGR2	1244
TFAP2C	1232
MYBL1	1196
MAX::MYC	1182
Tcf21	1159
TEAD1	1122
NRF1	1109
Esrrg	1093
USF2	1089
FOXA1	1087
ETS1	1078
OTX2	1053
TFAP4	1022
POU5F1B	1019
STAT3	1013
USF1	999
BHLHE40	995
E2F6	992
YY1	982
KLF5	902
RUNX1	866
Foxa2	847
ETV1	823
FOS	806
NR1H2::RXRA	730
KLF4	714
NFKB1	705
RUNX3	673
ELK4	662
ZNF263	643
TFAP2A-var.3	643
JUND	634
BATF::JUN	603
Rxra	596
FOSL2	583
Pparg::Rxra	581
TFDP1	578
SP4	548
Esrra	531
SNAI2	521
FOSL1	509
Atf3	504
JUN	503
SP3	490
REL	490
ELK3	482
E2F3	479
ERF	478
SMAD2::SMAD3::SMAD4	476
Hnf4a	464
FOS::JUN	463
Klf1	455
HEY1	451
THAP1	451
PBX1	447
ETV3	440
Gata4	434
ETV6	431
EBF1	427
CREB1	419
SOX9	413
Ar	407
FLI1	396
CEBPB	392
RELA	386
KLF9	381
NFKB2	375
PAX5	372
Gata1	366
EOMES	360
Atf1	359
Arnt	349
GATA3	346
Nr1h3::Rxra	337
Hand1::Tcf3	334
SP2	331
ELF3	321
SPI1	306
NFIA	303
STAT1::STAT2	294
GATA5	278
GATA2	276
TCF7L2	254
Bach1::Mafk	253
TP63	251
CEBPD	251
MAFK	251
ARNT::HIF1A	250
REST	238
CEBPA	236
EGR4	231
NFE2	227
Foxj2	225
NFYB	224
XBP1	222
Sox17	212
RARA::RXRA	210
Tcf7	207
Nfe2l2	205
NFATC3	196
ZNF143	194
FOXP1	191
NKX3-2	190
RUNX2	186
BATF3	186
MAF::NFE2	183
HNF4G	183
FOXH1	171
MAFF	170
JUNB	168
NFYA	167
Arntl	164
Mafb	160
TEAD2	158
PDX1	148
Foxo1	147
MYB	141
HSF1	141
Ahr::Arnt	137
FEV	134
STAT1	133
GATA1::TAL1	132
MAFG	131
GMEB2	126
POU2F2	126
KLF13	123
SCRT1	121
NR4A2	113
Stat5a::Stat5b	112
EGR3	109
BCL6B	108
HINFP	108
Arid3a	103
Bcl6	97
ZBTB18	89
NR3C2	89
ATF4	85
CDX2	82
PRDM1	79
SRF	77
LEF1	73
MYBL2	72
Vdr	69
RFX5	68
TP53	67
MEF2B	66
GRHL1	65
RXRB	59
Gmeb1	59
SREBF1	58
Ddit3::Cebpa	58
Hic1;	56
NFIL3	54
FOXP3	54
Gfi1b	54
TBX1	53
ETV4	53
ZBTB33	53
CLOCK	53
SREBF2	52
NFATC1	51
RXRG	51
ELF5	51
Dux	50
Ascl2	46
MEF2A	45
CREB3L1	43
NR2C2	43
TP73	41
SPIB	39
Nkx3-1	39
Rarg	39
NR3C1	38
IRF1	35
MAFG::NFE2L1	32
Rarb	30
DUX4	27
HNF1B	25
PPARG	23
Pax6	18
GLI2	18
Hes1	17
Nr5a2	16
CREB3	16
Mecom	14
RFX2	14
RXRA::VDR	13
Creb3l2	12
MEIS1	11
TBX19	10
MEF2D	10
PROX1	9
RORA(var.2)	8
Id2	8
MIXL1	8
BARX1	8
RARA	7
SMAD3	6
POU3F2	6
Rfx1	6
HNF1A	5
HSF2	5
ATF7	4
Sox1	4
Srebf1(var.2)	4
RORA	4
FOS::JUND	3
NFIC::TLX1	3
Pitx1	3
SOX4	2
DBP	2
FOXO4	2
E2F8	2
Arx	2
FOS::JUNB	2
HOXA13	1
NFAT5	1
HOXB13	1
HES5	1
TBP	1
Stat4	1
Hoxa11	1
TFEB	1
PAX3	1
ISX	1
Alx4	1
Tcfl5	1

Motif name

Number of overlap

9113

6509

5386

4713

4581