NAIK Genome Database

experiment name	hs_EmbryonicKidney_HEK293T_NormalOrCancer_CDK9_SRX367328	number of peaks	18961
antibody	CDK9
cell line	HEK293T	Number of reads	12007537
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Motif name	Number of overlap
E2F1	1530
SP1	1195
E2F4	1057
ZNF740	1045
MYCN	1038
EGR1	885
ZBTB7A	867
MYC	861
YY1	857
ERG	816
ELK1	752
HEY1	752
ELF1	708
TFAP2A-var.2	700
TAL1::TCF3	689
Gabpa	633
EGR2	601
NRF1	590
ETS1	585
TFAP2A	582
NR2F1	572
Tcf12	559
MYBL1	549
TCF3	547
TCF4	539
MAX	530
Esrrg	523
ZEB1	487
TFAP2C	479
ETV1	466
E2F6	453
TFDP1	442
STAT3	394
NFIC	368
MAX::MYC	360
ELK4	360
BHLHE40	353
Sox2	326
TFAP2A-var.3	319
KLF5	316
ELK3	301
ZNF263	277
RUNX1	269
ERF	258
CTCF	258
NFKB1	255
USF2	249
ETV3	240
BHLHE41	235
KLF4	233
SP3	222
ETV6	211
E2F3	202
REL	196
RUNX3	196
KLF9	178
Rxra	178
FLI1	176
EBF1	175
Klf1	175
USF1	175
Esrra	173
NEUROD1	172
STAT1::STAT2	171
NR1H2::RXRA	161
RELA	159
Pparg::Rxra	157
THAP1	157
NFATC3	152
NFKB2	151
OTX2	150
Hnf4a	146
SOX9	141
SMAD2::SMAD3::SMAD4	141
Tcf21	139
FOXA1	139
FOS	132
Gata1	132
FEV	130
CREB1	128
SP2	127
ELF3	126
TEAD4	123
SPI1	122
Arnt	120
Ar	117
PBX1	116
SNAI2	116
Atf1	114
GATA3	109
Hand1::Tcf3	109
NFIA	106
EGR4	106
PAX5	105
BATF::JUN	104
FOSL2	101
GATA2	100
TFAP4	99
TEAD1	97
CEBPB	95
JUND	95
SP4	94
Gata4	94
JUN	93
Foxa2	93
Ahr::Arnt	92
CEBPD	92
Atf3	88
FOSL1	86
GATA5	83
FOS::JUN	82
ARNT::HIF1A	77
NR4A2	74
STAT1	74
HINFP	73
RUNX2	73
CEBPA	72
HNF4G	68
Foxj2	67
Stat5a::Stat5b	66
GMEB2	65
XBP1	63
POU5F1B	62
Foxo1	59
HSF1	59
NFYB	57
NR3C2	56
EGR3	53
BATF3	52
NFE2	49
TCF7L2	47
ZNF143	47
NKX3-2	46
NFYA	45
Nfe2l2	44
Gmeb1	44
Nr1h3::Rxra	43
MYB	42
Tcf7	41
Arntl	41
TP63	40
MAF::NFE2	40
Arid3a	40
RARA::RXRA	39
GATA1::TAL1	39
BCL6B	38
PRDM1	37
FOXP1	35
KLF13	34
Bcl6	34
SPIB	33
Mafb	33
MAFF	33
Gfi1b	32
PDX1	32
TEAD2	31
MAFK	30
Bach1::Mafk	30
MEF2B	30
JUNB	29
Pou5f1::Sox2	29
ZBTB33	28
ETV4	27
CREB3L1	25
NFIL3	25
SCRT1	24
CDX2	24
RXRB	23
ATF4	23
MAFG	22
EOMES	22
IRF1	22
SREBF1	21
RXRG	20
MEF2A	20
Vdr	20
Ddit3::Cebpa	19
GLI2	19
TP53	19
FOXH1	19
Hic1;	18
Sox17	17
NFATC1	16
CLOCK	16
NR2C2	16
Rarg	15
FOXP3	15
MYBL2	14
ZBTB18	14
REST	14
Ascl2	14
Dux	13
SREBF2	13
SRF	12
PROX1	11
RFX5	10
Mecom	9
NR3C1	8
TP73	8
ELF5	8
DUX4	8
GRHL1	8
TBX1	8
Rarb	7
PPARG	7
POU2F2	7
CREB3	7
LEF1	7
HNF1B	6
Creb3l2	6
MEF2D	6
RXRA::VDR	6
RORA(var.2)	5
MAFG::NFE2L1	5
Nkx3-1	5
HOXA5	4
MIXL1	4
Id2	3
E2F8	3
Nr5a2	3
SMAD3	3
MEIS1	3
HNF1A	3
Pitx1	3
BARX1	3
Pax6	3
Srebf1(var.2)	3
HSF2	2
IRF2	2
Klf12	2
ISX	2
TBX19	2
Hes1	2
RFX2	2
SREBF2(var.2)	1
HES5	1
RORA	1
NFIC::TLX1	1
Rfx1	1
Hoxd9	1
Arx	1
Stat6	1
Stat4	1

Motif name

Number of overlap

1530

1195

1057

1045

1038