NAIK Genome Database

experiment name	hs_culturedNHLFcells_NHLF_undef_CTCF_SRX038664	number of peaks	32719
antibody	CTCF	link to motif view if antibody and consensus motif is the same
cell line	NHLF	Number of reads	8492014
sra ftp link	link	SRX search	link
homer denovo motifs	link
Genome view	link

Overlapping motifs:

Motif name	Number of overlap
CTCF	2974
MYC	774
MYCN	689
Tcf12	643
SP1	539
TCF4	527
TAL1::TCF3	472
NFIC	452
ZEB1	437
TCF3	376
MYBL1	309
E2F4	305
NR2F1	301
ZBTB7A	285
STAT3	248
RUNX3	240
RUNX1	231
Sox2	218
Gabpa	214
TFAP2A-var.2	212
ERG	199
E2F1	199
TFAP2C	195
ZNF740	190
Esrrg	188
TFAP2A	187
MAX	172
ELF1	170
ELK1	165
YY1	157
NR1H2::RXRA	151
TFAP4	150
MAX::MYC	141
EGR2	140
TEAD4	135
FOXA1	133
EGR1	129
Rxra	128
NEUROD1	120
ZNF263	119
Pparg::Rxra	118
Nr1h3::Rxra	117
BHLHE41	110
TFAP2A-var.3	109
KLF4	108
E2F3	100
Tcf21	98
GATA3	94
Gata1	94
KLF5	93
E2F6	92
ETS1	92
Foxa2	91
NFKB1	90
NRF1	89
THAP1	88
Ar	86
SOX9	85
TEAD1	83
Hnf4a	80
PBX1	80
STAT1::STAT2	78
NFIA	76
Arid3a	76
PAX5	73
EBF1	72
FOS	72
Esrra	70
OTX2	70
CEBPB	67
ETV1	65
FOSL2	65
USF2	65
GATA2	65
RELA	65
BHLHE40	62
USF1	62
Gata4	60
SMAD2::SMAD3::SMAD4	60
BATF::JUN	57
ELK4	56
REL	54
FLI1	53
ELF3	53
FOSL1	52
SPI1	51
KLF9	50
CEBPD	50
Klf1	49
SP4	49
Atf3	49
ETV6	48
TEAD2	48
Arnt	48
NKX3-2	47
POU5F1B	46
JUND	44
RUNX2	44
SP3	44
Atf1	43
Foxj2	42
CREB1	40
PDX1	40
CEBPA	39
ETV3	39
NFKB2	38
JUN	38
Mafb	37
TCF7L2	36
ELK3	36
STAT1	35
GATA5	35
ARNT::HIF1A	35
MYBL2	34
BCL6B	34
KLF13	32
Pou5f1::Sox2	32
Foxo1	32
HSF1	32
FOS::JUN	32
MAFK	32
Hand1::Tcf3	31
TFDP1	31
Tcf7	31
HEY1	31
RARA::RXRA	30
EOMES	28
Bcl6	28
HNF4G	27
Vdr	27
ERF	25
MYB	24
Stat5a::Stat5b	23
SP2	22
Nfe2l2	22
CDX2	22
TP63	22
NFE2	22
MAFF	21
ZBTB18	21
Bach1::Mafk	21
FOXP1	20
EGR4	20
FEV	20
MAF::NFE2	20
GATA1::TAL1	18
Ahr::Arnt	18
MEF2B	18
TP53	18
NR3C2	17
NFATC3	17
MAFG	16
Nkx3-1	16
MEF2A	16
FOXH1	16
NR4A2	16
NFYB	15
Gfi1b	15
ZNF143	15
TBX1	15
BATF3	14
NFYA	14
SCRT1	13
IRF1	13
PPARG	13
Hic1;	13
JUNB	12
REST	12
SNAI2	11
SPIB	11
XBP1	11
ELF5	10
FOXP3	10
SRF	9
NFIL3	9
SREBF1	9
SREBF2	8
NR3C1	8
Arntl	8
HINFP	8
POU2F2	8
EGR3	8
Dux	7
PRDM1	6
Ddit3::Cebpa	6
Gmeb1	6
Ascl2	6
Rarg	5
NFATC1	5
RFX5	5
DUX4	5
RXRB	5
GLI2	5
ATF4	5
RXRG	5
Mecom	4
Rarb	4
NR2C2	3
GMEB2	3
Sox17	3
GRHL1	3
HNF1B	3
ZBTB33	2
Nr5a2	2
RARA	2
ETV4	2
RORA(var.2)	2
CREB3L1	2
PROX1	2
Alx4	2
Pax6	2
TBX19	1
RXRA::VDR	1
FOS::JUND	1
MEIS1	1
RORA	1
MIXL1	1
CLOCK	1
Hes1	1
DBP	1
MEF2D	1
TFE3	1
Hoxa9	1
TP73	1
SMAD3	1
NKX2-3	1