Homer de novo Motif Results (hs_lymphoblastoid_GM12878_normal_RXRA_SRX100386_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 827
Total background sequences = 48426
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T A G C A T G C G C T A T A G C G A C T G C T A A T C G T C A G A C G T C T A G A C T G G T A C T C A G 1e-87-2.019e+029.67%0.32%21.4bp (26.7bp)CTCF/MA0139.1/Jaspar(0.921)
More Information | Similar Motifs Found
motif file (matrix)
2 C G T A A T C G A C G T A G C T C G A T G T A C C G T A A T G C A C G T A C G T A G T C G A T C A C G T G A T C A G C T G A C T 1e-20-4.705e+011.33%0.01%17.8bp (20.4bp)PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer(0.794)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G A C T G C T A G T C G A A T G C A T C G A G T C A C G T A C T G A C G T A G T C A G T C A G T C 1e-13-3.134e+011.81%0.10%25.8bp (27.2bp)PB0200.1_Zfp187_2/Jaspar(0.549)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C C G A T A C T G C T G A C G T A A C G T A C G T C G T A G A T C C G A T A G T C G C T A T C G A 1e-13-3.015e+011.33%0.04%22.2bp (30.1bp)Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.708)
More Information | Similar Motifs Found
motif file (matrix)
5 C G T A A C T G C G T A C T A G A C T G A C T G A G T C A C T G A G T C A G T C 1e-12-2.981e+011.93%0.14%18.4bp (33.8bp)YY1(Zf)/Promoter/Homer(0.685)
More Information | Similar Motifs Found
motif file (matrix)
6 C G T A A C T G A C T G T G A C C G T A C G T A T G C A C G T A A G T C C T G A A G C T C T A G A G T C 1e-12-2.888e+010.97%0.01%31.4bp (35.4bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.678)
More Information | Similar Motifs Found
motif file (matrix)
7 A C T G A T C G G T A C A C T G A G T C C T A G A G T C A C G T A C G T G T A C A G T C A C T G A T C G 1e-12-2.770e+011.21%0.04%23.9bp (31.2bp)Gabpa/MA0062.2/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C C G T A A C T G A C T G G T A C A C G T C T A G C G T A A G T C A C G T A C G T C G T A A T C G 1e-11-2.683e+010.73%0.00%23.6bp (19.0bp)MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer(0.612)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G T C A C G T A G T C C G T A A T G C A C G T A C T G G T C A A C T G A G T C A G T C A G T C A C G T 1e-10-2.512e+010.60%0.00%24.6bp (0.0bp)PB0099.1_Zfp691_1/Jaspar(0.603)
More Information | Similar Motifs Found
motif file (matrix)
10 * C T A G G A T C A C G T A G C T A G T C G T A C A C G T A C T G A T C G G A C T 1e-10-2.480e+013.51%0.75%26.9bp (27.7bp)EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer(0.804)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A C G T G T A C G A T C G A C T G A C T A C G T A G C T A C G T A G C T C T G A A C T G A C T G 1e-9-2.143e+012.90%0.60%17.7bp (27.2bp)SPI1/MA0080.4/Jaspar(0.676)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C T G C G A T T G C A C T G A T A G C A G T C C G T A C G T A C T G A A C G T 1e-9-2.086e+011.69%0.19%22.4bp (28.6bp)PB0016.1_Foxj1_1/Jaspar(0.720)
More Information | Similar Motifs Found
motif file (matrix)
13 * G T A C C G T A G C A T G T C A C G A T A G T C A G T C C G T A A C T G G T C A 1e-8-2.031e+012.06%0.30%30.8bp (26.5bp)Hand1::Tcf3/MA0092.1/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G A T A C G T A C T G A G T C A G T C C G T A 1e-8-1.965e+010.60%0.01%12.2bp (14.7bp)Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer(0.606)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A C G T A C G T A G T C C T A G G A T C A C T G A G T C A C T G T G C A T G C A A C T G C A T G A G T C G T C A A T C G 1e-8-1.955e+011.45%0.14%18.0bp (29.3bp)E2F(E2F)/Hela-CellCycle-Expression/Homer(0.577)
More Information | Similar Motifs Found
motif file (matrix)
16 * A T G C G T A C G T C A A C G T A C T G A G T C A C T G A G C T A C T G A C T G C G T A A C T G A T C G A G T C T G C A A C T G 1e-8-1.860e+010.73%0.02%15.2bp (23.6bp)ZNF354C/MA0130.1/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
17 * G C A T A T G C G T A C T A C G A T G C C G A T C T G A T C G A A G T C A G T C 1e-8-1.846e+013.02%0.75%23.8bp (26.9bp)NR2F1/MA0017.2/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C G C T A G T A C C G T A A T G C G T A C A T G C G C T A A G T C G T C A G T A C T G A C A G T C 1e-4-1.065e+010.60%0.04%19.8bp (30.8bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.728)
More Information | Similar Motifs Found
motif file (matrix)