Homer Known Motif Enrichment Results (hs_hESC_hESC_undef_SOX2_SRX1487284_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 541, Total Background Sequences = 47676
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-130-3.013e+020.0000129.023.84%486.31.02%motif file (matrix) svg
2 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-128-2.950e+020.0000282.052.13%4947.810.42%motif file (matrix) svg
3 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-126-2.915e+020.0000209.038.63%2301.24.85%motif file (matrix) svg
4 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-111-2.563e+020.0000257.047.50%4629.99.75%motif file (matrix) svg
5 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-104-2.417e+020.0000175.032.35%1890.13.98%motif file (matrix) svg
6 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-94-2.179e+020.0000235.043.44%4482.79.44%motif file (matrix) svg
7 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-84-1.951e+020.0000183.033.83%2829.25.96%motif file (matrix) svg
8 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-61-1.416e+020.0000139.025.69%2186.74.61%motif file (matrix) svg
9 C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-49-1.150e+020.0000102.018.85%1379.42.91%motif file (matrix) svg
10 C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-39-8.992e+010.0000108.019.96%2075.74.37%motif file (matrix) svg
11 G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer1e-35-8.167e+010.000078.014.42%1143.22.41%motif file (matrix) svg
12 G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-35-8.090e+010.000067.012.38%813.61.71%motif file (matrix) svg
13 G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-22-5.151e+010.000053.09.80%845.61.78%motif file (matrix) svg
14 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-13-3.070e+010.000043.07.95%948.82.00%motif file (matrix) svg
15 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-11-2.659e+010.000044.08.13%1121.02.36%motif file (matrix) svg
16 A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-10-2.377e+010.000051.09.43%1573.73.31%motif file (matrix) svg
17 A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-6-1.581e+010.0000109.020.15%5822.112.26%motif file (matrix) svg
18 A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-5-1.377e+010.000068.012.57%3234.16.81%motif file (matrix) svg
19 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer1e-5-1.351e+010.000049.09.06%2053.34.33%motif file (matrix) svg
20 C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-5-1.276e+010.000170.012.94%3466.77.30%motif file (matrix) svg
21 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-5-1.273e+010.0001190.035.12%12442.826.21%motif file (matrix) svg
22 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer1e-4-1.134e+010.000246.08.50%2038.54.29%motif file (matrix) svg
23 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-4-1.132e+010.000257.010.54%2746.65.79%motif file (matrix) svg
24 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-4-1.084e+010.0003135.024.95%8453.317.81%motif file (matrix) svg
25 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-3-9.110e+000.001660.011.09%3186.16.71%motif file (matrix) svg
26 C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-3-8.240e+000.003715.02.77%449.90.95%motif file (matrix) svg
27 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-3-7.998e+000.004549.09.06%2560.85.39%motif file (matrix) svg
28 C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-3-7.675e+000.006042.07.76%2122.14.47%motif file (matrix) svg
29 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-3-7.500e+000.006949.09.06%2619.05.52%motif file (matrix) svg
30 C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-3-7.410e+000.007349.09.06%2630.95.54%motif file (matrix) svg
31 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-3-7.275e+000.008139.07.21%1964.44.14%motif file (matrix) svg
32 G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer1e-3-7.090e+000.009525.04.62%1080.12.28%motif file (matrix) svg
33 C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer1e-3-7.087e+000.009536.06.65%1784.53.76%motif file (matrix) svg
34 C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-3-6.921e+000.010682.015.16%5103.810.75%motif file (matrix) svg
35 A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer1e-2-6.565e+000.014748.08.87%2668.65.62%motif file (matrix) svg
36 A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-2-6.083e+000.023134.06.28%1758.53.70%motif file (matrix) svg
37 T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-2-6.038e+000.023559.010.91%3539.37.46%motif file (matrix) svg
38 A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-2-5.816e+000.028510.01.85%305.00.64%motif file (matrix) svg
39 C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-2-5.659e+000.032536.06.65%1945.94.10%motif file (matrix) svg
40 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-2-5.436e+000.039747.08.69%2757.95.81%motif file (matrix) svg
41 T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer1e-2-5.294e+000.044610.01.85%328.80.69%motif file (matrix) svg
42 T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-2-5.133e+000.05114.00.74%62.70.13%motif file (matrix) svg