Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-130 | -3.013e+02 | 0.0000 | 129.0 | 23.84% | 486.3 | 1.02% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-128 | -2.950e+02 | 0.0000 | 282.0 | 52.13% | 4947.8 | 10.42% | motif file (matrix) |
svg |
3 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-126 | -2.915e+02 | 0.0000 | 209.0 | 38.63% | 2301.2 | 4.85% | motif file (matrix) |
svg |
4 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-111 | -2.563e+02 | 0.0000 | 257.0 | 47.50% | 4629.9 | 9.75% | motif file (matrix) |
svg |
5 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-104 | -2.417e+02 | 0.0000 | 175.0 | 32.35% | 1890.1 | 3.98% | motif file (matrix) |
svg |
6 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-94 | -2.179e+02 | 0.0000 | 235.0 | 43.44% | 4482.7 | 9.44% | motif file (matrix) |
svg |
7 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-84 | -1.951e+02 | 0.0000 | 183.0 | 33.83% | 2829.2 | 5.96% | motif file (matrix) |
svg |
8 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-61 | -1.416e+02 | 0.0000 | 139.0 | 25.69% | 2186.7 | 4.61% | motif file (matrix) |
svg |
9 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-49 | -1.150e+02 | 0.0000 | 102.0 | 18.85% | 1379.4 | 2.91% | motif file (matrix) |
svg |
10 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-39 | -8.992e+01 | 0.0000 | 108.0 | 19.96% | 2075.7 | 4.37% | motif file (matrix) |
svg |
11 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-35 | -8.167e+01 | 0.0000 | 78.0 | 14.42% | 1143.2 | 2.41% | motif file (matrix) |
svg |
12 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-35 | -8.090e+01 | 0.0000 | 67.0 | 12.38% | 813.6 | 1.71% | motif file (matrix) |
svg |
13 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-22 | -5.151e+01 | 0.0000 | 53.0 | 9.80% | 845.6 | 1.78% | motif file (matrix) |
svg |
14 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-13 | -3.070e+01 | 0.0000 | 43.0 | 7.95% | 948.8 | 2.00% | motif file (matrix) |
svg |
15 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-11 | -2.659e+01 | 0.0000 | 44.0 | 8.13% | 1121.0 | 2.36% | motif file (matrix) |
svg |
16 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-10 | -2.377e+01 | 0.0000 | 51.0 | 9.43% | 1573.7 | 3.31% | motif file (matrix) |
svg |
17 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.581e+01 | 0.0000 | 109.0 | 20.15% | 5822.1 | 12.26% | motif file (matrix) |
svg |
18 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-5 | -1.377e+01 | 0.0000 | 68.0 | 12.57% | 3234.1 | 6.81% | motif file (matrix) |
svg |
19 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-5 | -1.351e+01 | 0.0000 | 49.0 | 9.06% | 2053.3 | 4.33% | motif file (matrix) |
svg |
20 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-5 | -1.276e+01 | 0.0001 | 70.0 | 12.94% | 3466.7 | 7.30% | motif file (matrix) |
svg |
21 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.273e+01 | 0.0001 | 190.0 | 35.12% | 12442.8 | 26.21% | motif file (matrix) |
svg |
22 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-4 | -1.134e+01 | 0.0002 | 46.0 | 8.50% | 2038.5 | 4.29% | motif file (matrix) |
svg |
23 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-4 | -1.132e+01 | 0.0002 | 57.0 | 10.54% | 2746.6 | 5.79% | motif file (matrix) |
svg |
24 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.084e+01 | 0.0003 | 135.0 | 24.95% | 8453.3 | 17.81% | motif file (matrix) |
svg |
25 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -9.110e+00 | 0.0016 | 60.0 | 11.09% | 3186.1 | 6.71% | motif file (matrix) |
svg |
26 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-3 | -8.240e+00 | 0.0037 | 15.0 | 2.77% | 449.9 | 0.95% | motif file (matrix) |
svg |
27 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-3 | -7.998e+00 | 0.0045 | 49.0 | 9.06% | 2560.8 | 5.39% | motif file (matrix) |
svg |
28 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.675e+00 | 0.0060 | 42.0 | 7.76% | 2122.1 | 4.47% | motif file (matrix) |
svg |
29 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-3 | -7.500e+00 | 0.0069 | 49.0 | 9.06% | 2619.0 | 5.52% | motif file (matrix) |
svg |
30 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.410e+00 | 0.0073 | 49.0 | 9.06% | 2630.9 | 5.54% | motif file (matrix) |
svg |
31 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -7.275e+00 | 0.0081 | 39.0 | 7.21% | 1964.4 | 4.14% | motif file (matrix) |
svg |
32 |
| Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer | 1e-3 | -7.090e+00 | 0.0095 | 25.0 | 4.62% | 1080.1 | 2.28% | motif file (matrix) |
svg |
33 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -7.087e+00 | 0.0095 | 36.0 | 6.65% | 1784.5 | 3.76% | motif file (matrix) |
svg |
34 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -6.921e+00 | 0.0106 | 82.0 | 15.16% | 5103.8 | 10.75% | motif file (matrix) |
svg |
35 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -6.565e+00 | 0.0147 | 48.0 | 8.87% | 2668.6 | 5.62% | motif file (matrix) |
svg |
36 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -6.083e+00 | 0.0231 | 34.0 | 6.28% | 1758.5 | 3.70% | motif file (matrix) |
svg |
37 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -6.038e+00 | 0.0235 | 59.0 | 10.91% | 3539.3 | 7.46% | motif file (matrix) |
svg |
38 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.816e+00 | 0.0285 | 10.0 | 1.85% | 305.0 | 0.64% | motif file (matrix) |
svg |
39 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -5.659e+00 | 0.0325 | 36.0 | 6.65% | 1945.9 | 4.10% | motif file (matrix) |
svg |
40 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.436e+00 | 0.0397 | 47.0 | 8.69% | 2757.9 | 5.81% | motif file (matrix) |
svg |
41 |
| Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.294e+00 | 0.0446 | 10.0 | 1.85% | 328.8 | 0.69% | motif file (matrix) |
svg |
42 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.133e+00 | 0.0511 | 4.0 | 0.74% | 62.7 | 0.13% | motif file (matrix) |
svg |