Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-83 | -1.918e+02 | 0.0000 | 112.0 | 15.07% | 572.0 | 1.19% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-64 | -1.484e+02 | 0.0000 | 193.0 | 25.98% | 2991.0 | 6.24% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-62 | -1.428e+02 | 0.0000 | 168.0 | 22.61% | 2327.7 | 4.86% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-57 | -1.334e+02 | 0.0000 | 168.0 | 22.61% | 2491.3 | 5.20% | motif file (matrix) |
svg |
5 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-43 | -9.934e+01 | 0.0000 | 137.0 | 18.44% | 2182.3 | 4.56% | motif file (matrix) |
svg |
6 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-40 | -9.241e+01 | 0.0000 | 110.0 | 14.80% | 1503.7 | 3.14% | motif file (matrix) |
svg |
7 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-40 | -9.241e+01 | 0.0000 | 79.0 | 10.63% | 725.2 | 1.51% | motif file (matrix) |
svg |
8 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-39 | -9.181e+01 | 0.0000 | 94.0 | 12.65% | 1084.8 | 2.26% | motif file (matrix) |
svg |
9 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-39 | -9.160e+01 | 0.0000 | 100.0 | 13.46% | 1242.9 | 2.59% | motif file (matrix) |
svg |
10 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-39 | -9.072e+01 | 0.0000 | 101.0 | 13.59% | 1282.9 | 2.68% | motif file (matrix) |
svg |
11 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-39 | -9.038e+01 | 0.0000 | 126.0 | 16.96% | 2018.2 | 4.21% | motif file (matrix) |
svg |
12 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-34 | -7.935e+01 | 0.0000 | 103.0 | 13.86% | 1531.3 | 3.20% | motif file (matrix) |
svg |
13 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-34 | -7.897e+01 | 0.0000 | 62.0 | 8.34% | 505.1 | 1.05% | motif file (matrix) |
svg |
14 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-32 | -7.465e+01 | 0.0000 | 179.0 | 24.09% | 4394.6 | 9.17% | motif file (matrix) |
svg |
15 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-32 | -7.443e+01 | 0.0000 | 107.0 | 14.40% | 1751.7 | 3.66% | motif file (matrix) |
svg |
16 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-30 | -7.125e+01 | 0.0000 | 317.0 | 42.66% | 11135.6 | 23.25% | motif file (matrix) |
svg |
17 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-23 | -5.489e+01 | 0.0000 | 60.0 | 8.08% | 743.0 | 1.55% | motif file (matrix) |
svg |
18 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-23 | -5.462e+01 | 0.0000 | 117.0 | 15.75% | 2617.9 | 5.46% | motif file (matrix) |
svg |
19 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-22 | -5.279e+01 | 0.0000 | 95.0 | 12.79% | 1867.8 | 3.90% | motif file (matrix) |
svg |
20 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-22 | -5.174e+01 | 0.0000 | 100.0 | 13.46% | 2074.0 | 4.33% | motif file (matrix) |
svg |
21 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-21 | -4.969e+01 | 0.0000 | 64.0 | 8.61% | 940.2 | 1.96% | motif file (matrix) |
svg |
22 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-21 | -4.941e+01 | 0.0000 | 84.0 | 11.31% | 1577.1 | 3.29% | motif file (matrix) |
svg |
23 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-21 | -4.838e+01 | 0.0000 | 102.0 | 13.73% | 2250.2 | 4.70% | motif file (matrix) |
svg |
24 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-19 | -4.585e+01 | 0.0000 | 92.0 | 12.38% | 1958.4 | 4.09% | motif file (matrix) |
svg |
25 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-19 | -4.537e+01 | 0.0000 | 79.0 | 10.63% | 1511.5 | 3.16% | motif file (matrix) |
svg |
26 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-18 | -4.157e+01 | 0.0000 | 165.0 | 22.21% | 5233.3 | 10.92% | motif file (matrix) |
svg |
27 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-16 | -3.769e+01 | 0.0000 | 39.0 | 5.25% | 459.4 | 0.96% | motif file (matrix) |
svg |
28 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.684e+01 | 0.0000 | 75.0 | 10.09% | 1612.5 | 3.37% | motif file (matrix) |
svg |
29 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-13 | -3.153e+01 | 0.0000 | 138.0 | 18.57% | 4536.2 | 9.47% | motif file (matrix) |
svg |
30 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-11 | -2.638e+01 | 0.0000 | 30.0 | 4.04% | 398.1 | 0.83% | motif file (matrix) |
svg |
31 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-10 | -2.373e+01 | 0.0000 | 39.0 | 5.25% | 724.3 | 1.51% | motif file (matrix) |
svg |
32 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-8 | -2.065e+01 | 0.0000 | 64.0 | 8.61% | 1787.9 | 3.73% | motif file (matrix) |
svg |
33 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.919e+01 | 0.0000 | 34.0 | 4.58% | 676.8 | 1.41% | motif file (matrix) |
svg |
34 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-8 | -1.905e+01 | 0.0000 | 60.0 | 8.08% | 1694.0 | 3.54% | motif file (matrix) |
svg |
35 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-7 | -1.646e+01 | 0.0000 | 76.0 | 10.23% | 2554.0 | 5.33% | motif file (matrix) |
svg |
36 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-7 | -1.622e+01 | 0.0000 | 8.0 | 1.08% | 34.4 | 0.07% | motif file (matrix) |
svg |
37 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.609e+01 | 0.0000 | 50.0 | 6.73% | 1410.9 | 2.95% | motif file (matrix) |
svg |
38 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-6 | -1.519e+01 | 0.0000 | 10.0 | 1.35% | 71.4 | 0.15% | motif file (matrix) |
svg |
39 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.444e+01 | 0.0000 | 11.0 | 1.48% | 97.5 | 0.20% | motif file (matrix) |
svg |
40 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-6 | -1.428e+01 | 0.0000 | 40.0 | 5.38% | 1076.7 | 2.25% | motif file (matrix) |
svg |
41 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-6 | -1.425e+01 | 0.0000 | 22.0 | 2.96% | 403.2 | 0.84% | motif file (matrix) |
svg |
42 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.417e+01 | 0.0000 | 20.0 | 2.69% | 341.6 | 0.71% | motif file (matrix) |
svg |
43 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-5 | -1.303e+01 | 0.0000 | 60.0 | 8.08% | 2029.5 | 4.24% | motif file (matrix) |
svg |
44 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.270e+01 | 0.0000 | 10.0 | 1.35% | 94.8 | 0.20% | motif file (matrix) |
svg |
45 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-5 | -1.206e+01 | 0.0000 | 30.0 | 4.04% | 765.2 | 1.60% | motif file (matrix) |
svg |
46 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.154e+01 | 0.0001 | 40.0 | 5.38% | 1209.7 | 2.53% | motif file (matrix) |
svg |
47 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.143e+01 | 0.0001 | 213.0 | 28.67% | 10517.5 | 21.96% | motif file (matrix) |
svg |
48 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-4 | -1.122e+01 | 0.0001 | 48.0 | 6.46% | 1588.5 | 3.32% | motif file (matrix) |
svg |
49 |
| Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer | 1e-4 | -1.117e+01 | 0.0001 | 38.0 | 5.11% | 1141.7 | 2.38% | motif file (matrix) |
svg |
50 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-4 | -1.108e+01 | 0.0001 | 68.0 | 9.15% | 2559.5 | 5.34% | motif file (matrix) |
svg |
51 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.078e+01 | 0.0001 | 92.0 | 12.38% | 3817.0 | 7.97% | motif file (matrix) |
svg |
52 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.053e+01 | 0.0002 | 76.0 | 10.23% | 3010.9 | 6.29% | motif file (matrix) |
svg |
53 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.040e+01 | 0.0002 | 65.0 | 8.75% | 2466.2 | 5.15% | motif file (matrix) |
svg |
54 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -1.020e+01 | 0.0003 | 48.0 | 6.46% | 1655.3 | 3.46% | motif file (matrix) |
svg |
55 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -1.020e+01 | 0.0003 | 37.0 | 4.98% | 1150.7 | 2.40% | motif file (matrix) |
svg |
56 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -9.705e+00 | 0.0004 | 27.0 | 3.63% | 744.7 | 1.55% | motif file (matrix) |
svg |
57 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.402e+00 | 0.0005 | 44.0 | 5.92% | 1521.9 | 3.18% | motif file (matrix) |
svg |
58 |
| RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer | 1e-3 | -9.116e+00 | 0.0007 | 15.0 | 2.02% | 303.5 | 0.63% | motif file (matrix) |
svg |
59 |
| Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer | 1e-3 | -9.033e+00 | 0.0007 | 14.0 | 1.88% | 271.5 | 0.57% | motif file (matrix) |
svg |
60 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-3 | -8.981e+00 | 0.0008 | 58.0 | 7.81% | 2237.4 | 4.67% | motif file (matrix) |
svg |
61 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.900e+00 | 0.0008 | 40.0 | 5.38% | 1367.2 | 2.85% | motif file (matrix) |
svg |
62 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -8.260e+00 | 0.0015 | 7.0 | 0.94% | 78.9 | 0.16% | motif file (matrix) |
svg |
63 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-3 | -8.245e+00 | 0.0015 | 55.0 | 7.40% | 2151.1 | 4.49% | motif file (matrix) |
svg |
64 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-3 | -7.751e+00 | 0.0024 | 7.0 | 0.94% | 85.8 | 0.18% | motif file (matrix) |
svg |
65 |
| SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer | 1e-3 | -7.591e+00 | 0.0028 | 31.0 | 4.17% | 1034.8 | 2.16% | motif file (matrix) |
svg |
66 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.416e+00 | 0.0033 | 18.0 | 2.42% | 475.6 | 0.99% | motif file (matrix) |
svg |
67 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -6.985e+00 | 0.0050 | 190.0 | 25.57% | 9947.2 | 20.76% | motif file (matrix) |
svg |
68 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -6.485e+00 | 0.0082 | 114.0 | 15.34% | 5586.3 | 11.66% | motif file (matrix) |
svg |
69 |
| GFY(?)/Promoter/Homer | 1e-2 | -6.429e+00 | 0.0085 | 7.0 | 0.94% | 107.4 | 0.22% | motif file (matrix) |
svg |
70 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -6.383e+00 | 0.0088 | 40.0 | 5.38% | 1561.8 | 3.26% | motif file (matrix) |
svg |
71 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -6.336e+00 | 0.0091 | 60.0 | 8.08% | 2606.5 | 5.44% | motif file (matrix) |
svg |
72 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.018e+00 | 0.0123 | 19.0 | 2.56% | 584.1 | 1.22% | motif file (matrix) |
svg |
73 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -5.835e+00 | 0.0146 | 25.0 | 3.36% | 870.2 | 1.82% | motif file (matrix) |
svg |
74 |
| MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.707e+00 | 0.0163 | 21.0 | 2.83% | 692.6 | 1.45% | motif file (matrix) |
svg |
75 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.592e+00 | 0.0181 | 25.0 | 3.36% | 887.2 | 1.85% | motif file (matrix) |
svg |
76 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.004e+00 | 0.0321 | 8.0 | 1.08% | 175.5 | 0.37% | motif file (matrix) |
svg |
77 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.852e+00 | 0.0369 | 18.0 | 2.42% | 607.2 | 1.27% | motif file (matrix) |
svg |
78 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -4.841e+00 | 0.0369 | 43.0 | 5.79% | 1873.9 | 3.91% | motif file (matrix) |
svg |
79 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.822e+00 | 0.0371 | 6.0 | 0.81% | 110.0 | 0.23% | motif file (matrix) |
svg |
80 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -4.813e+00 | 0.0371 | 33.0 | 4.44% | 1351.0 | 2.82% | motif file (matrix) |
svg |
81 |
| ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer | 1e-2 | -4.631e+00 | 0.0438 | 8.0 | 1.08% | 187.6 | 0.39% | motif file (matrix) |
svg |