Homer de novo Motif Results (hs_MammaryGland_MCF7_Cancer_CTCF_ERX016234_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 848
Total background sequences = 47478
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G G T A C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G C T A G A C T G G T A C C T G A A T G C G A C T 1e-548-1.264e+0353.07%1.68%17.5bp (30.5bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.975)
More Information | Similar Motifs Found
motif file (matrix)
2 C G T A G T A C C G T A C G T A C G A T G C T A A G T C A C G T A G T C C G T A C T A G C T A G A T C G 1e-13-3.048e+011.06%0.02%26.5bp (19.6bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.571)
More Information | Similar Motifs Found
motif file (matrix)
3 * A C T G A T G C C G T A A C T G C T A G A G T C C G T A A C T G C T A G A G T C A C G T A G T C A C G T 1e-11-2.554e+010.83%0.01%22.0bp (18.3bp)SD0002.1_at_AC_acceptor/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
4 * T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G 1e-10-2.527e+011.30%0.06%22.2bp (24.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.646)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A C G T A G T C A G C T A G T C A C G T A G T C A C G T A C T G A G T C G A T C A C T G A G T C 1e-10-2.494e+010.59%0.00%18.7bp (0.0bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.514)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G T C T C G A A G T C C G T A C T A G A T G C G C T A A G T C C G T A A C T G A G T C A C T G A G T C A T G C A C G T A G T C 1e-10-2.494e+010.59%0.00%21.7bp (0.0bp)PB0199.1_Zfp161_2/Jaspar(0.568)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A T C G G T C A C T A G C T A G A C T G A T C G A C T G C A T G A T C G A C T G A G T C A T C G A T G C A C G T A C T G 1e-10-2.437e+011.06%0.03%24.9bp (25.5bp)EGR1/MA0162.2/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C A C G T A G T C A G T C C G T A C G T A A C T G A T C G C G T A A G T C C G T A A C T G A C T G 1e-9-2.149e+010.59%0.00%30.4bp (22.8bp)SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer(0.719)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G T C A T G C A T C G A C T G G T A C A C T G G A C T A C T G A G T C A T G C A G T C A G T C C T A G A C T G A T G C C T G A 1e-9-2.149e+010.59%0.01%19.2bp (13.2bp)PB0052.1_Plagl1_1/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G A T C G A T C A G T G C A T G C T A T C G A C G T A T C G A T G C A A T G C 1e-5-1.185e+016.60%3.50%28.9bp (28.9bp)PB0187.1_Tcf7_2/Jaspar(0.709)
More Information | Similar Motifs Found
motif file (matrix)