Information for 6-CACAGCTAGGGGG (Motif 4)

T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
Reverse Opposite:
A G T C A G T C G T A C A G T C A G T C A G C T C G T A A C T G A G T C A C G T A C T G A C G T A T C G
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.807
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif29.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets46.5 +/- 22.2bp
Average Position of motif in Background50.8 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACAGCTAGGGGG
CACAGCAGGGGG-
 T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTAGGGGG
NAACAGCTGG----
 A C G T T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTAGGGGG-
DCHCAGCAGGRGGCC
 A C G T T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACAGCTAGGGGG
NAHCAGCTGD----
 A C G T T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAGCTAGGGGG
GACAGCTGCAG--
 T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAGCTAGGGGG
CACAGN-------
 T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACAGCTAGGGGG-
CACAGCGGGGGGTC
 T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACAGCTAGGGGG
AACAGCTGCAG--
 T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACAGCTAGGGGG
AACAGCTG-----
 T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACAGCTAGGGGG-
NCGCAGCGGGGGGTC
 A C G T T A G C C G T A A G T C C G T A A C T G A G T C C G A T C T G A C T A G C T A G A C T G C T A G C T A G A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C