Homer de novo Motif Results (hs_LungCarcinoma_A549_cancer_FOXA1_SRX190282_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 788
Total background sequences = 46916
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T A C G C A T C T G A C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A C T G A C T A G 1e-272-6.278e+0244.16%3.69%18.8bp (31.2bp)Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer(0.975)
More Information | Similar Motifs Found
motif file (matrix)
2 G A T C G C T A T A G C A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T G A C T T G A C 1e-44-1.020e+029.01%0.95%23.8bp (27.3bp)FOS/MA0476.1/Jaspar(0.951)
More Information | Similar Motifs Found
motif file (matrix)
3 A T C G A G T C A C T G A T G C A G T C G T A C A G T C G A T C A C G T C T G A T A C G C G A T A C T G A T C G G T C A G A T C 1e-37-8.645e+014.82%0.21%20.7bp (25.6bp)CTCF/MA0139.1/Jaspar(0.947)
More Information | Similar Motifs Found
motif file (matrix)
4 A T C G C G T A C G T A A C T G G T A C C G T A A C G T A T G C C T G A A G T C C T G A C G T A C G T A 1e-12-2.838e+011.40%0.05%27.5bp (21.9bp)Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer(0.676)
More Information | Similar Motifs Found
motif file (matrix)
5 T G A C A G T C G A T C A G T C C T A G A G T C G T A C A G T C A G T C A G T C A C G T G T A C G T A C 1e-12-2.795e+011.27%0.04%19.3bp (20.2bp)PB0076.1_Sp4_1/Jaspar(0.825)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T A G C T A T G C G A T C A G T C T G C A A T G C A T C G T A G C A C G T A C T G T A C G C T A G A C T G C G T A A C T G 1e-11-2.699e+010.76%0.01%24.6bp (19.4bp)PB0101.1_Zic1_1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C G T A C T G A G C T C G A T G A T C G A T C A G C T A C G T A C T G A T C G C G T A C T G A C T A G C T G A G T C A C T A G 1e-11-2.699e+010.76%0.01%13.8bp (19.7bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.580)
More Information | Similar Motifs Found
motif file (matrix)
8 * C A G T A C T G A C G T A T C G A C T G A G T C G T C A C T A G A C T G C G T A C T G A A T C G G C A T C G T A C G T A G T C A 1e-10-2.525e+010.63%0.00%21.7bp (0.0bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.685)
More Information | Similar Motifs Found
motif file (matrix)
9 * A G T C A G C T G T A C C G T A A G C T A C G T A G T C A T G C A G T C A C G T C T A G A C T G C G T A 1e-10-2.364e+010.89%0.02%21.1bp (31.6bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.623)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G G T C A C G T A A C G T A T G C A C G T C G T A A C T G C G T A C G T A A C G T A C G T A G T C A C G T A C T G A C G T 1e-9-2.179e+010.63%0.00%20.5bp (17.9bp)PB0090.1_Zbtb12_1/Jaspar(0.558)
More Information | Similar Motifs Found
motif file (matrix)
11 * C T A G A C G T A T G C A G T C C G T A A T C G A G T C A C G T A G T C A C G T C T A G A G T C C G T A A C T G A G T C G A C T 1e-8-1.978e+010.63%0.01%13.7bp (11.3bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.534)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A C T G A G T C C G T A A C T G A G T C G T C A A C G T A C T G A C T G A C G T A C T G A C T G 1e-8-1.954e+010.51%0.00%10.9bp (3.0bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.590)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C A C G T A G C T G C T A A C G T A G T C G A T C C T A G A C T G C G T A 1e-8-1.893e+011.02%0.05%16.4bp (23.8bp)Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer(0.711)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A C G T A C T G A G C T G T C A C G T A A C T G A C G T A C G T G T A C A G T C A G T C C G T A 1e-7-1.678e+010.51%0.01%27.8bp (0.0bp)Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)