Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer | 1e-75 | -1.745e+02 | 0.0000 | 150.0 | 22.97% | 1598.4 | 3.44% | motif file (matrix) |
svg |
2 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-29 | -6.723e+01 | 0.0000 | 84.0 | 12.86% | 1332.4 | 2.86% | motif file (matrix) |
svg |
3 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-24 | -5.536e+01 | 0.0000 | 99.0 | 15.16% | 2156.8 | 4.64% | motif file (matrix) |
svg |
4 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-22 | -5.277e+01 | 0.0000 | 86.0 | 13.17% | 1735.7 | 3.73% | motif file (matrix) |
svg |
5 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-22 | -5.208e+01 | 0.0000 | 44.0 | 6.74% | 443.9 | 0.95% | motif file (matrix) |
svg |
6 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-22 | -5.068e+01 | 0.0000 | 51.0 | 7.81% | 639.0 | 1.37% | motif file (matrix) |
svg |
7 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-20 | -4.806e+01 | 0.0000 | 69.0 | 10.57% | 1246.1 | 2.68% | motif file (matrix) |
svg |
8 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-20 | -4.651e+01 | 0.0000 | 68.0 | 10.41% | 1248.6 | 2.68% | motif file (matrix) |
svg |
9 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-17 | -4.139e+01 | 0.0000 | 97.0 | 14.85% | 2549.2 | 5.48% | motif file (matrix) |
svg |
10 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-17 | -4.045e+01 | 0.0000 | 70.0 | 10.72% | 1480.7 | 3.18% | motif file (matrix) |
svg |
11 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-16 | -3.715e+01 | 0.0000 | 55.0 | 8.42% | 1023.4 | 2.20% | motif file (matrix) |
svg |
12 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-14 | -3.452e+01 | 0.0000 | 67.0 | 10.26% | 1546.9 | 3.33% | motif file (matrix) |
svg |
13 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-14 | -3.276e+01 | 0.0000 | 70.0 | 10.72% | 1728.2 | 3.72% | motif file (matrix) |
svg |
14 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-13 | -3.211e+01 | 0.0000 | 91.0 | 13.94% | 2676.6 | 5.75% | motif file (matrix) |
svg |
15 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-13 | -3.171e+01 | 0.0000 | 65.0 | 9.95% | 1560.9 | 3.36% | motif file (matrix) |
svg |
16 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-13 | -3.146e+01 | 0.0000 | 92.0 | 14.09% | 2753.8 | 5.92% | motif file (matrix) |
svg |
17 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-12 | -2.930e+01 | 0.0000 | 73.0 | 11.18% | 1990.1 | 4.28% | motif file (matrix) |
svg |
18 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-11 | -2.562e+01 | 0.0000 | 75.0 | 11.49% | 2246.2 | 4.83% | motif file (matrix) |
svg |
19 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-10 | -2.420e+01 | 0.0000 | 33.0 | 5.05% | 580.6 | 1.25% | motif file (matrix) |
svg |
20 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-10 | -2.407e+01 | 0.0000 | 43.0 | 6.58% | 942.3 | 2.03% | motif file (matrix) |
svg |
21 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-9 | -2.296e+01 | 0.0000 | 89.0 | 13.63% | 3068.3 | 6.60% | motif file (matrix) |
svg |
22 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-9 | -2.280e+01 | 0.0000 | 33.0 | 5.05% | 613.6 | 1.32% | motif file (matrix) |
svg |
23 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-9 | -2.159e+01 | 0.0000 | 58.0 | 8.88% | 1662.0 | 3.57% | motif file (matrix) |
svg |
24 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-9 | -2.081e+01 | 0.0000 | 74.0 | 11.33% | 2452.9 | 5.27% | motif file (matrix) |
svg |
25 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-8 | -1.845e+01 | 0.0000 | 80.0 | 12.25% | 2901.7 | 6.24% | motif file (matrix) |
svg |
26 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-7 | -1.766e+01 | 0.0000 | 14.0 | 2.14% | 140.8 | 0.30% | motif file (matrix) |
svg |
27 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-7 | -1.756e+01 | 0.0000 | 71.0 | 10.87% | 2501.7 | 5.38% | motif file (matrix) |
svg |
28 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.739e+01 | 0.0000 | 121.0 | 18.53% | 5222.0 | 11.23% | motif file (matrix) |
svg |
29 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-7 | -1.672e+01 | 0.0000 | 68.0 | 10.41% | 2404.3 | 5.17% | motif file (matrix) |
svg |
30 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-7 | -1.660e+01 | 0.0000 | 62.0 | 9.49% | 2112.7 | 4.54% | motif file (matrix) |
svg |
31 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-7 | -1.619e+01 | 0.0000 | 16.0 | 2.45% | 211.3 | 0.45% | motif file (matrix) |
svg |
32 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-6 | -1.568e+01 | 0.0000 | 49.0 | 7.50% | 1537.2 | 3.30% | motif file (matrix) |
svg |
33 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-6 | -1.551e+01 | 0.0000 | 49.0 | 7.50% | 1546.3 | 3.32% | motif file (matrix) |
svg |
34 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.500e+01 | 0.0000 | 24.0 | 3.68% | 498.4 | 1.07% | motif file (matrix) |
svg |
35 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.452e+01 | 0.0000 | 224.0 | 34.30% | 11914.0 | 25.61% | motif file (matrix) |
svg |
36 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.448e+01 | 0.0000 | 116.0 | 17.76% | 5225.8 | 11.23% | motif file (matrix) |
svg |
37 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-6 | -1.442e+01 | 0.0000 | 46.0 | 7.04% | 1463.4 | 3.15% | motif file (matrix) |
svg |
38 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-6 | -1.399e+01 | 0.0000 | 66.0 | 10.11% | 2490.9 | 5.35% | motif file (matrix) |
svg |
39 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-6 | -1.394e+01 | 0.0000 | 103.0 | 15.77% | 4531.0 | 9.74% | motif file (matrix) |
svg |
40 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-5 | -1.315e+01 | 0.0000 | 167.0 | 25.57% | 8476.0 | 18.22% | motif file (matrix) |
svg |
41 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-5 | -1.238e+01 | 0.0000 | 57.0 | 8.73% | 2139.7 | 4.60% | motif file (matrix) |
svg |
42 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-5 | -1.230e+01 | 0.0000 | 87.0 | 13.32% | 3782.3 | 8.13% | motif file (matrix) |
svg |
43 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.166e+01 | 0.0001 | 32.0 | 4.90% | 955.1 | 2.05% | motif file (matrix) |
svg |
44 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-4 | -1.151e+01 | 0.0001 | 22.0 | 3.37% | 531.4 | 1.14% | motif file (matrix) |
svg |
45 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-4 | -1.148e+01 | 0.0001 | 57.0 | 8.73% | 2207.9 | 4.75% | motif file (matrix) |
svg |
46 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-4 | -1.077e+01 | 0.0002 | 12.0 | 1.84% | 189.7 | 0.41% | motif file (matrix) |
svg |
47 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.069e+01 | 0.0002 | 42.0 | 6.43% | 1490.7 | 3.20% | motif file (matrix) |
svg |
48 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-4 | -1.030e+01 | 0.0003 | 17.0 | 2.60% | 376.0 | 0.81% | motif file (matrix) |
svg |
49 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-4 | -9.855e+00 | 0.0004 | 51.0 | 7.81% | 2018.9 | 4.34% | motif file (matrix) |
svg |
50 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.539e+00 | 0.0005 | 37.0 | 5.67% | 1315.9 | 2.83% | motif file (matrix) |
svg |
51 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-4 | -9.503e+00 | 0.0005 | 29.0 | 4.44% | 927.5 | 1.99% | motif file (matrix) |
svg |
52 |
| Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer | 1e-3 | -9.207e+00 | 0.0007 | 21.0 | 3.22% | 578.2 | 1.24% | motif file (matrix) |
svg |
53 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-3 | -8.979e+00 | 0.0009 | 74.0 | 11.33% | 3387.8 | 7.28% | motif file (matrix) |
svg |
54 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-3 | -8.736e+00 | 0.0011 | 24.0 | 3.68% | 734.3 | 1.58% | motif file (matrix) |
svg |
55 |
| HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer | 1e-3 | -8.704e+00 | 0.0011 | 13.0 | 1.99% | 273.0 | 0.59% | motif file (matrix) |
svg |
56 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-3 | -8.665e+00 | 0.0011 | 66.0 | 10.11% | 2961.7 | 6.37% | motif file (matrix) |
svg |
57 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-3 | -8.563e+00 | 0.0012 | 41.0 | 6.28% | 1592.0 | 3.42% | motif file (matrix) |
svg |
58 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -8.350e+00 | 0.0015 | 30.0 | 4.59% | 1043.7 | 2.24% | motif file (matrix) |
svg |
59 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -8.039e+00 | 0.0020 | 20.0 | 3.06% | 586.6 | 1.26% | motif file (matrix) |
svg |
60 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -7.895e+00 | 0.0023 | 111.0 | 17.00% | 5762.8 | 12.39% | motif file (matrix) |
svg |
61 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.824e+00 | 0.0024 | 66.0 | 10.11% | 3055.5 | 6.57% | motif file (matrix) |
svg |
62 |
| CRE(bZIP)/Promoter/Homer | 1e-3 | -7.585e+00 | 0.0030 | 15.0 | 2.30% | 388.4 | 0.84% | motif file (matrix) |
svg |
63 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-3 | -7.211e+00 | 0.0043 | 204.0 | 31.24% | 11921.9 | 25.63% | motif file (matrix) |
svg |
64 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-3 | -7.194e+00 | 0.0043 | 52.0 | 7.96% | 2320.4 | 4.99% | motif file (matrix) |
svg |
65 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.897e+00 | 0.0057 | 50.0 | 7.66% | 2238.2 | 4.81% | motif file (matrix) |
svg |
66 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -6.766e+00 | 0.0064 | 10.0 | 1.53% | 216.1 | 0.46% | motif file (matrix) |
svg |
67 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.654e+00 | 0.0070 | 13.0 | 1.99% | 340.5 | 0.73% | motif file (matrix) |
svg |
68 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-2 | -6.177e+00 | 0.0111 | 73.0 | 11.18% | 3687.9 | 7.93% | motif file (matrix) |
svg |
69 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -5.956e+00 | 0.0137 | 31.0 | 4.75% | 1272.9 | 2.74% | motif file (matrix) |
svg |
70 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.924e+00 | 0.0139 | 11.0 | 1.68% | 284.8 | 0.61% | motif file (matrix) |
svg |
71 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.598e+00 | 0.0190 | 27.0 | 4.13% | 1087.0 | 2.34% | motif file (matrix) |
svg |
72 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-2 | -5.541e+00 | 0.0198 | 41.0 | 6.28% | 1872.6 | 4.03% | motif file (matrix) |
svg |
73 |
| p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer | 1e-2 | -5.086e+00 | 0.0308 | 4.0 | 0.61% | 51.1 | 0.11% | motif file (matrix) |
svg |
74 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.707e+00 | 0.0444 | 5.0 | 0.77% | 89.4 | 0.19% | motif file (matrix) |
svg |
75 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.662e+00 | 0.0459 | 158.0 | 24.20% | 9469.4 | 20.36% | motif file (matrix) |
svg |
76 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -4.649e+00 | 0.0459 | 34.0 | 5.21% | 1570.8 | 3.38% | motif file (matrix) |
svg |
77 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.619e+00 | 0.0466 | 5.0 | 0.77% | 91.3 | 0.20% | motif file (matrix) |
svg |