Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 653)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46465)	% of Background Sequences with Motif
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-75	-1.745e+02	0.0000	150.0	22.97%	1598.4	3.44%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-29	-6.723e+01	0.0000	84.0	12.86%	1332.4	2.86%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-24	-5.536e+01	0.0000	99.0	15.16%	2156.8	4.64%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-22	-5.277e+01	0.0000	86.0	13.17%	1735.7	3.73%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-22	-5.208e+01	0.0000	44.0	6.74%	443.9	0.95%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-22	-5.068e+01	0.0000	51.0	7.81%	639.0	1.37%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-20	-4.806e+01	0.0000	69.0	10.57%	1246.1	2.68%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-20	-4.651e+01	0.0000	68.0	10.41%	1248.6	2.68%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-17	-4.139e+01	0.0000	97.0	14.85%	2549.2	5.48%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-17	-4.045e+01	0.0000	70.0	10.72%	1480.7	3.18%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-16	-3.715e+01	0.0000	55.0	8.42%	1023.4	2.20%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-14	-3.452e+01	0.0000	67.0	10.26%	1546.9	3.33%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-14	-3.276e+01	0.0000	70.0	10.72%	1728.2	3.72%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-13	-3.211e+01	0.0000	91.0	13.94%	2676.6	5.75%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-13	-3.171e+01	0.0000	65.0	9.95%	1560.9	3.36%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-13	-3.146e+01	0.0000	92.0	14.09%	2753.8	5.92%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-12	-2.930e+01	0.0000	73.0	11.18%	1990.1	4.28%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-11	-2.562e+01	0.0000	75.0	11.49%	2246.2	4.83%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-10	-2.420e+01	0.0000	33.0	5.05%	580.6	1.25%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-10	-2.407e+01	0.0000	43.0	6.58%	942.3	2.03%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-9	-2.296e+01	0.0000	89.0	13.63%	3068.3	6.60%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-9	-2.280e+01	0.0000	33.0	5.05%	613.6	1.32%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e-9	-2.159e+01	0.0000	58.0	8.88%	1662.0	3.57%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-9	-2.081e+01	0.0000	74.0	11.33%	2452.9	5.27%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-8	-1.845e+01	0.0000	80.0	12.25%	2901.7	6.24%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-7	-1.766e+01	0.0000	14.0	2.14%	140.8	0.30%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-7	-1.756e+01	0.0000	71.0	10.87%	2501.7	5.38%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-7	-1.739e+01	0.0000	121.0	18.53%	5222.0	11.23%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-7	-1.672e+01	0.0000	68.0	10.41%	2404.3	5.17%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-7	-1.660e+01	0.0000	62.0	9.49%	2112.7	4.54%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-7	-1.619e+01	0.0000	16.0	2.45%	211.3	0.45%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-6	-1.568e+01	0.0000	49.0	7.50%	1537.2	3.30%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e-6	-1.551e+01	0.0000	49.0	7.50%	1546.3	3.32%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-6	-1.500e+01	0.0000	24.0	3.68%	498.4	1.07%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-6	-1.452e+01	0.0000	224.0	34.30%	11914.0	25.61%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-6	-1.448e+01	0.0000	116.0	17.76%	5225.8	11.23%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-6	-1.442e+01	0.0000	46.0	7.04%	1463.4	3.15%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-6	-1.399e+01	0.0000	66.0	10.11%	2490.9	5.35%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-6	-1.394e+01	0.0000	103.0	15.77%	4531.0	9.74%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-5	-1.315e+01	0.0000	167.0	25.57%	8476.0	18.22%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-5	-1.238e+01	0.0000	57.0	8.73%	2139.7	4.60%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-5	-1.230e+01	0.0000	87.0	13.32%	3782.3	8.13%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e-5	-1.166e+01	0.0001	32.0	4.90%	955.1	2.05%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e-4	-1.151e+01	0.0001	22.0	3.37%	531.4	1.14%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e-4	-1.148e+01	0.0001	57.0	8.73%	2207.9	4.75%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-4	-1.077e+01	0.0002	12.0	1.84%	189.7	0.41%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-4	-1.069e+01	0.0002	42.0	6.43%	1490.7	3.20%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-4	-1.030e+01	0.0003	17.0	2.60%	376.0	0.81%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-4	-9.855e+00	0.0004	51.0	7.81%	2018.9	4.34%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-4	-9.539e+00	0.0005	37.0	5.67%	1315.9	2.83%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-4	-9.503e+00	0.0005	29.0	4.44%	927.5	1.99%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e-3	-9.207e+00	0.0007	21.0	3.22%	578.2	1.24%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-3	-8.979e+00	0.0009	74.0	11.33%	3387.8	7.28%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-3	-8.736e+00	0.0011	24.0	3.68%	734.3	1.58%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e-3	-8.704e+00	0.0011	13.0	1.99%	273.0	0.59%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e-3	-8.665e+00	0.0011	66.0	10.11%	2961.7	6.37%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-3	-8.563e+00	0.0012	41.0	6.28%	1592.0	3.42%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-3	-8.350e+00	0.0015	30.0	4.59%	1043.7	2.24%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-3	-8.039e+00	0.0020	20.0	3.06%	586.6	1.26%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e-3	-7.895e+00	0.0023	111.0	17.00%	5762.8	12.39%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-3	-7.824e+00	0.0024	66.0	10.11%	3055.5	6.57%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-3	-7.585e+00	0.0030	15.0	2.30%	388.4	0.84%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e-3	-7.211e+00	0.0043	204.0	31.24%	11921.9	25.63%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-3	-7.194e+00	0.0043	52.0	7.96%	2320.4	4.99%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-2	-6.897e+00	0.0057	50.0	7.66%	2238.2	4.81%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-2	-6.766e+00	0.0064	10.0	1.53%	216.1	0.46%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-2	-6.654e+00	0.0070	13.0	1.99%	340.5	0.73%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-2	-6.177e+00	0.0111	73.0	11.18%	3687.9	7.93%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e-2	-5.956e+00	0.0137	31.0	4.75%	1272.9	2.74%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-2	-5.924e+00	0.0139	11.0	1.68%	284.8	0.61%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-2	-5.598e+00	0.0190	27.0	4.13%	1087.0	2.34%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-2	-5.541e+00	0.0198	41.0	6.28%	1872.6	4.03%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-2	-5.086e+00	0.0308	4.0	0.61%	51.1	0.11%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-2	-4.707e+00	0.0444	5.0	0.77%	89.4	0.19%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-4.662e+00	0.0459	158.0	24.20%	9469.4	20.36%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-2	-4.649e+00	0.0459	34.0	5.21%	1570.8	3.38%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-2	-4.619e+00	0.0466	5.0	0.77%	91.3	0.20%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-1	-4.592e+00	0.0473	50.0	7.66%	2525.6	5.43%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e-1	-4.561e+00	0.0482	39.0	5.97%	1872.7	4.03%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-4.472e+00	0.0520	11.0	1.68%	348.5	0.75%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-1	-4.470e+00	0.0520	7.0	1.07%	171.1	0.37%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-4.424e+00	0.0532	20.0	3.06%	809.9	1.74%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-4.381e+00	0.0542	6.0	0.92%	134.5	0.29%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-1	-4.381e+00	0.0542	6.0	0.92%	134.5	0.29%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-4.155e+00	0.0672	137.0	20.98%	8204.1	17.64%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-1	-3.999e+00	0.0776	24.0	3.68%	1069.4	2.30%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-1	-3.940e+00	0.0814	32.0	4.90%	1538.8	3.31%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-1	-3.890e+00	0.0846	4.0	0.61%	73.5	0.16%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-1	-3.876e+00	0.0848	13.0	1.99%	482.2	1.04%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-3.869e+00	0.0848	26.0	3.98%	1197.2	2.57%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e-1	-3.783e+00	0.0910	90.0	13.78%	5202.9	11.18%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-1	-3.738e+00	0.0942	34.0	5.21%	1683.6	3.62%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-3.653e+00	0.1015	5.0	0.77%	117.0	0.25%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e-1	-3.624e+00	0.1033	26.0	3.98%	1225.4	2.63%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e-1	-3.602e+00	0.1045	8.0	1.23%	251.5	0.54%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-1	-3.338e+00	0.1346	66.0	10.11%	3750.1	8.06%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-1	-3.308e+00	0.1373	51.0	7.81%	2800.7	6.02%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e-1	-3.268e+00	0.1414	59.0	9.04%	3316.7	7.13%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e-1	-3.045e+00	0.1751	22.0	3.37%	1060.4	2.28%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-3.023e+00	0.1772	16.0	2.45%	716.0	1.54%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-1	-2.940e+00	0.1906	54.0	8.27%	3065.6	6.59%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-1	-2.908e+00	0.1948	22.0	3.37%	1077.0	2.32%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.886e+00	0.1972	32.0	4.90%	1687.4	3.63%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e-1	-2.843e+00	0.2038	6.0	0.92%	194.5	0.42%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-2.752e+00	0.2211	5.0	0.77%	151.5	0.33%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-1	-2.730e+00	0.2239	5.0	0.77%	152.2	0.33%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-1	-2.701e+00	0.2285	3.0	0.46%	66.7	0.14%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-2.696e+00	0.2285	4.0	0.61%	109.0	0.23%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e-1	-2.594e+00	0.2496	91.0	13.94%	5585.8	12.01%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-2.586e+00	0.2496	28.0	4.29%	1488.7	3.20%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-1	-2.526e+00	0.2624	19.0	2.91%	947.8	2.04%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-2.514e+00	0.2632	33.0	5.05%	1813.6	3.90%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-1	-2.501e+00	0.2642	5.0	0.77%	163.6	0.35%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-2.374e+00	0.2974	67.0	10.26%	4052.9	8.71%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-1	-2.347e+00	0.3026	30.0	4.59%	1654.7	3.56%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e0	-2.290e+00	0.3150	3.0	0.46%	79.3	0.17%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-2.290e+00	0.3150	3.0	0.46%	79.8	0.17%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-2.261e+00	0.3216	30.0	4.59%	1670.4	3.59%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-2.213e+00	0.3316	2.0	0.31%	40.5	0.09%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-2.213e+00	0.3316	2.0	0.31%	41.0	0.09%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.162e+00	0.3463	173.0	26.49%	11348.6	24.40%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.122e+00	0.3575	82.0	12.56%	5132.8	11.03%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-2.121e+00	0.3575	6.0	0.92%	237.1	0.51%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e0	-2.092e+00	0.3625	34.0	5.21%	1960.5	4.21%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e0	-2.066e+00	0.3691	11.0	1.68%	526.4	1.13%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.992e+00	0.3940	4.0	0.61%	140.5	0.30%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-1.944e+00	0.4101	1.0	0.15%	12.0	0.03%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-1.909e+00	0.4214	36.0	5.51%	2131.0	4.58%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.899e+00	0.4226	9.0	1.38%	426.8	0.92%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.894e+00	0.4226	3.0	0.46%	95.3	0.20%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.831e+00	0.4454	6.0	0.92%	259.0	0.56%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.813e+00	0.4501	10.0	1.53%	495.5	1.07%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-1.803e+00	0.4511	4.0	0.61%	151.9	0.33%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-1.799e+00	0.4511	7.0	1.07%	319.8	0.69%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.787e+00	0.4517	135.0	20.67%	8892.1	19.12%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.733e+00	0.4731	9.0	1.38%	444.5	0.96%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.708e+00	0.4813	4.0	0.61%	157.4	0.34%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.686e+00	0.4886	17.0	2.60%	948.5	2.04%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.672e+00	0.4919	27.0	4.13%	1597.3	3.43%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.649e+00	0.5000	4.0	0.61%	161.1	0.35%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.640e+00	0.5010	28.0	4.29%	1670.4	3.59%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.637e+00	0.5010	62.0	9.49%	3947.1	8.48%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-1.625e+00	0.5014	5.0	0.77%	219.6	0.47%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.609e+00	0.5058	10.0	1.53%	520.2	1.12%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-1.581e+00	0.5166	9.0	1.38%	462.4	0.99%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-1.549e+00	0.5295	4.0	0.61%	168.1	0.36%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.512e+00	0.5460	19.0	2.91%	1109.7	2.39%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.509e+00	0.5460	6.0	0.92%	289.0	0.62%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.502e+00	0.5460	30.0	4.59%	1836.5	3.95%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-1.495e+00	0.5460	8.0	1.23%	411.8	0.89%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-1.492e+00	0.5460	40.0	6.13%	2508.2	5.39%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.488e+00	0.5460	39.0	5.97%	2442.5	5.25%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.411e+00	0.5804	26.0	3.98%	1593.4	3.43%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.397e+00	0.5845	63.0	9.65%	4105.5	8.83%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.387e+00	0.5864	3.0	0.46%	123.4	0.27%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-1.372e+00	0.5916	16.0	2.45%	941.1	2.02%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.359e+00	0.5954	27.0	4.13%	1673.4	3.60%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-1.336e+00	0.6059	2.0	0.31%	71.2	0.15%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-1.326e+00	0.6077	18.0	2.76%	1082.8	2.33%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.318e+00	0.6088	27.0	4.13%	1684.7	3.62%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.313e+00	0.6088	9.0	1.38%	498.6	1.07%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.301e+00	0.6116	3.0	0.46%	129.9	0.28%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.251e+00	0.6389	1.0	0.15%	24.4	0.05%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.223e+00	0.6531	7.0	1.07%	383.4	0.82%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-1.221e+00	0.6531	28.0	4.29%	1779.0	3.82%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e0	-1.197e+00	0.6626	42.0	6.43%	2742.7	5.90%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.196e+00	0.6626	3.0	0.46%	137.9	0.30%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.162e+00	0.6777	4.0	0.61%	201.6	0.43%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-1.162e+00	0.6777	65.0	9.95%	4344.8	9.34%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-1.158e+00	0.6777	33.0	5.05%	2139.6	4.60%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.146e+00	0.6777	9.0	1.38%	525.0	1.13%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.116e+00	0.6935	21.0	3.22%	1334.9	2.87%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-1.111e+00	0.6935	10.0	1.53%	596.8	1.28%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e0	-1.101e+00	0.6957	29.0	4.44%	1884.6	4.05%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.100e+00	0.6957	3.0	0.46%	145.3	0.31%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-1.092e+00	0.6957	5.0	0.77%	272.5	0.59%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.087e+00	0.6957	8.0	1.23%	468.0	1.01%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.083e+00	0.6957	21.0	3.22%	1343.4	2.89%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-1.074e+00	0.6957	68.0	10.41%	4595.1	9.88%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.056e+00	0.7033	28.0	4.29%	1830.1	3.93%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-1.043e+00	0.7089	34.0	5.21%	2248.8	4.83%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-1.034e+00	0.7115	3.0	0.46%	151.1	0.32%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e0	-1.033e+00	0.7115	23.0	3.52%	1494.3	3.21%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-1.023e+00	0.7115	3.0	0.46%	152.7	0.33%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.011e+00	0.7158	18.0	2.76%	1158.9	2.49%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.010e+00	0.7158	8.0	1.23%	481.7	1.04%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.007e+00	0.7158	18.0	2.76%	1159.5	2.49%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-1.003e+00	0.7158	24.0	3.68%	1572.2	3.38%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-9.919e-01	0.7158	3.0	0.46%	155.9	0.34%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-9.790e-01	0.7197	11.0	1.68%	689.8	1.48%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-9.623e-01	0.7280	4.0	0.61%	223.0	0.48%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-9.460e-01	0.7361	1.0	0.15%	35.9	0.08%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-9.404e-01	0.7364	26.0	3.98%	1731.6	3.72%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-9.329e-01	0.7382	20.0	3.06%	1318.8	2.83%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-9.175e-01	0.7458	7.0	1.07%	430.4	0.93%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-9.166e-01	0.7458	8.0	1.23%	498.1	1.07%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-9.070e-01	0.7460	20.0	3.06%	1326.5	2.85%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-9.066e-01	0.7460	11.0	1.68%	705.7	1.52%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-9.018e-01	0.7460	6.0	0.92%	365.5	0.79%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-9.016e-01	0.7460	23.0	3.52%	1536.9	3.30%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-8.840e-01	0.7481	7.0	1.07%	436.9	0.94%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-8.804e-01	0.7481	8.0	1.23%	505.2	1.09%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-8.677e-01	0.7529	7.0	1.07%	439.6	0.95%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-8.437e-01	0.7674	25.0	3.83%	1696.8	3.65%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-8.407e-01	0.7674	8.0	1.23%	513.2	1.10%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-8.403e-01	0.7674	5.0	0.77%	307.8	0.66%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-8.356e-01	0.7674	2.0	0.31%	105.9	0.23%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-8.181e-01	0.7722	16.0	2.45%	1075.2	2.31%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-8.164e-01	0.7722	28.0	4.29%	1917.5	4.12%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-8.142e-01	0.7722	59.0	9.04%	4103.8	8.82%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-7.919e-01	0.7815	28.0	4.29%	1927.7	4.14%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-7.843e-01	0.7837	21.0	3.22%	1437.9	3.09%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-7.745e-01	0.7877	1.0	0.15%	44.0	0.09%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-7.717e-01	0.7877	11.0	1.68%	739.0	1.59%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-7.655e-01	0.7877	23.0	3.52%	1585.2	3.41%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-7.652e-01	0.7877	12.0	1.84%	810.2	1.74%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-7.541e-01	0.7891	3.0	0.46%	182.0	0.39%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-7.532e-01	0.7891	2.0	0.31%	113.2	0.24%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-7.252e-01	0.8048	21.0	3.22%	1460.0	3.14%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-7.208e-01	0.8048	17.0	2.60%	1177.3	2.53%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-7.116e-01	0.8085	35.0	5.36%	2459.2	5.29%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-6.857e-01	0.8259	5.0	0.77%	335.0	0.72%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-6.841e-01	0.8259	4.0	0.61%	263.1	0.57%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-6.789e-01	0.8259	36.0	5.51%	2547.6	5.48%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-6.711e-01	0.8269	7.0	1.07%	480.1	1.03%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-6.582e-01	0.8339	16.0	2.45%	1128.2	2.43%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	-6.573e-01	0.8339	1.0	0.15%	52.1	0.11%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-6.488e-01	0.8344	3.0	0.46%	197.9	0.43%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-6.444e-01	0.8345	1.0	0.15%	53.7	0.12%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-6.348e-01	0.8389	27.0	4.13%	1926.7	4.14%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-6.291e-01	0.8400	44.0	6.74%	3147.7	6.77%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-6.235e-01	0.8411	3.0	0.46%	201.9	0.43%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-6.196e-01	0.8411	1.0	0.15%	55.6	0.12%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-6.086e-01	0.8464	25.0	3.83%	1795.1	3.86%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-5.817e-01	0.8658	52.0	7.96%	3752.7	8.07%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-5.777e-01	0.8658	2.0	0.31%	134.1	0.29%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-5.357e-01	0.8988	9.0	1.38%	663.1	1.43%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-5.229e-01	0.9066	31.0	4.75%	2275.4	4.89%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-5.100e-01	0.9145	6.0	0.92%	448.7	0.96%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.059e-01	0.9145	89.0	13.63%	6477.8	13.93%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-4.982e-01	0.9178	10.0	1.53%	750.9	1.61%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-4.861e-01	0.9251	2.0	0.31%	148.5	0.32%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-4.766e-01	0.9301	12.0	1.84%	907.3	1.95%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-4.612e-01	0.9406	10.0	1.53%	764.7	1.64%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.361e-01	0.9606	117.0	17.92%	8571.7	18.43%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.335e-01	0.9606	5.0	0.77%	394.1	0.85%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-4.099e-01	0.9781	21.0	3.22%	1610.3	3.46%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e0	-3.924e-01	0.9913	6.0	0.92%	485.5	1.04%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-3.922e-01	0.9913	10.0	1.53%	793.3	1.71%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-3.922e-01	0.9913	60.0	9.19%	4491.6	9.66%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-3.869e-01	0.9913	8.0	1.23%	642.4	1.38%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-3.853e-01	0.9913	52.0	7.96%	3913.6	8.41%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-3.783e-01	0.9913	4.0	0.61%	332.5	0.71%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-3.751e-01	0.9913	4.0	0.61%	333.6	0.72%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-3.724e-01	0.9913	12.0	1.84%	955.5	2.05%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-3.563e-01	0.9957	14.0	2.14%	1117.0	2.40%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-3.499e-01	0.9982	4.0	0.61%	341.3	0.73%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-3.348e-01	1.0000	9.0	1.38%	744.0	1.60%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-3.342e-01	1.0000	2.0	0.31%	180.0	0.39%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-3.019e-01	1.0000	8.0	1.23%	681.0	1.46%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-2.987e-01	1.0000	7.0	1.07%	603.6	1.30%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-2.949e-01	1.0000	17.0	2.60%	1385.4	2.98%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-2.882e-01	1.0000	11.0	1.68%	925.8	1.99%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-2.876e-01	1.0000	14.0	2.14%	1159.7	2.49%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-2.868e-01	1.0000	21.0	3.22%	1697.2	3.65%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.776e-01	1.0000	22.0	3.37%	1781.8	3.83%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-2.706e-01	1.0000	3.0	0.46%	286.0	0.61%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.679e-01	1.0000	3.0	0.46%	286.3	0.62%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-2.621e-01	1.0000	7.0	1.07%	622.7	1.34%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-2.610e-01	1.0000	38.0	5.82%	3007.2	6.46%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-2.409e-01	1.0000	38.0	5.82%	3031.8	6.52%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-2.312e-01	1.0000	2.0	0.31%	210.0	0.45%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e0	-2.285e-01	1.0000	1.0	0.15%	113.7	0.24%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-2.249e-01	1.0000	36.0	5.51%	2900.6	6.24%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.239e-01	1.0000	12.0	1.84%	1049.6	2.26%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-2.216e-01	1.0000	78.0	11.94%	6041.2	12.99%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.214e-01	1.0000	6.0	0.92%	563.2	1.21%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-2.206e-01	1.0000	38.0	5.82%	3057.4	6.57%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.197e-01	1.0000	9.0	1.38%	811.8	1.75%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-2.157e-01	1.0000	10.0	1.53%	895.5	1.93%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-2.146e-01	1.0000	1.0	0.15%	117.5	0.25%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-2.089e-01	1.0000	8.0	1.23%	737.6	1.59%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	-2.047e-01	1.0000	1.0	0.15%	121.0	0.26%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-2.016e-01	1.0000	1.0	0.15%	121.6	0.26%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-2.009e-01	1.0000	36.0	5.51%	2932.6	6.30%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.940e-01	1.0000	8.0	1.23%	748.4	1.61%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.911e-01	1.0000	114.0	17.46%	8754.4	18.82%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-1.878e-01	1.0000	16.0	2.45%	1400.9	3.01%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-1.875e-01	1.0000	8.0	1.23%	753.2	1.62%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.872e-01	1.0000	31.0	4.75%	2569.7	5.52%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.835e-01	1.0000	14.0	2.14%	1245.4	2.68%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.835e-01	1.0000	18.0	2.76%	1563.1	3.36%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-1.812e-01	1.0000	9.0	1.38%	841.7	1.81%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.808e-01	1.0000	1.0	0.15%	128.6	0.28%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.742e-01	1.0000	5.0	0.77%	508.8	1.09%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.738e-01	1.0000	30.0	4.59%	2511.7	5.40%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.683e-01	1.0000	6.0	0.92%	599.6	1.29%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.633e-01	1.0000	9.0	1.38%	857.4	1.84%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e0	-1.541e-01	1.0000	3.0	0.46%	341.7	0.73%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.460e-01	1.0000	25.0	3.83%	2164.5	4.65%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.395e-01	1.0000	1.0	0.15%	145.9	0.31%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.386e-01	1.0000	6.0	0.92%	625.0	1.34%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-1.317e-01	1.0000	35.0	5.36%	2969.3	6.38%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.263e-01	1.0000	4.0	0.61%	455.7	0.98%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.158e-01	1.0000	22.0	3.37%	1977.6	4.25%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-1.114e-01	1.0000	1.0	0.15%	160.4	0.34%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.111e-01	1.0000	2.0	0.31%	272.6	0.59%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.088e-01	1.0000	8.0	1.23%	831.3	1.79%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.072e-01	1.0000	2.0	0.31%	275.5	0.59%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-9.981e-02	1.0000	5.0	0.77%	574.5	1.23%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-9.642e-02	1.0000	46.0	7.04%	3904.7	8.39%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-9.571e-02	1.0000	11.0	1.68%	1108.2	2.38%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-8.995e-02	1.0000	21.0	3.22%	1948.6	4.19%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-8.673e-02	1.0000	3.0	0.46%	397.8	0.86%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-8.561e-02	1.0000	2.0	0.31%	294.4	0.63%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-8.409e-02	1.0000	1.0	0.15%	179.4	0.39%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-8.166e-02	1.0000	1.0	0.15%	181.2	0.39%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e0	-7.295e-02	1.0000	16.0	2.45%	1575.6	3.39%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-6.958e-02	1.0000	8.0	1.23%	892.3	1.92%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-6.951e-02	1.0000	1.0	0.15%	192.1	0.41%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-6.830e-02	1.0000	2.0	0.31%	313.6	0.67%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-6.363e-02	1.0000	47.0	7.20%	4093.1	8.80%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-6.060e-02	1.0000	7.0	1.07%	819.4	1.76%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-5.995e-02	1.0000	35.0	5.36%	3161.3	6.80%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-5.849e-02	1.0000	2.0	0.31%	326.9	0.70%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-5.764e-02	1.0000	3.0	0.46%	436.5	0.94%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-4.677e-02	1.0000	10.0	1.53%	1126.6	2.42%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-4.230e-02	1.0000	44.0	6.74%	3959.5	8.51%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-4.132e-02	1.0000	2.0	0.31%	355.7	0.76%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-3.114e-02	1.0000	20.0	3.06%	2061.8	4.43%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-3.066e-02	1.0000	67.0	10.26%	5847.8	12.57%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-3.025e-02	1.0000	48.0	7.35%	4357.0	9.37%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-2.962e-02	1.0000	34.0	5.21%	3235.2	6.95%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-2.246e-02	1.0000	11.0	1.68%	1318.5	2.83%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.070e-02	1.0000	3.0	0.46%	531.1	1.14%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-2.019e-02	1.0000	5.0	0.77%	750.2	1.61%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.877e-02	1.0000	1.0	0.15%	283.6	0.61%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-1.872e-02	1.0000	69.0	10.57%	6134.0	13.19%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-1.766e-02	1.0000	6.0	0.92%	867.5	1.86%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.683e-02	1.0000	4.0	0.61%	662.2	1.42%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.583e-02	1.0000	2.0	0.31%	435.0	0.94%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e0	-1.235e-02	1.0000	18.0	2.76%	2037.2	4.38%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.174e-02	1.0000	1.0	0.15%	316.2	0.68%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.062e-02	1.0000	1.0	0.15%	323.6	0.70%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-9.933e-03	1.0000	28.0	4.29%	2943.9	6.33%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e0	-8.283e-03	1.0000	3.0	0.46%	613.2	1.32%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-7.418e-03	1.0000	9.0	1.38%	1267.1	2.72%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-5.972e-03	1.0000	5.0	0.77%	874.5	1.88%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-5.431e-03	1.0000	3.0	0.46%	650.3	1.40%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-3.178e-03	1.0000	36.0	5.51%	3826.3	8.23%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-2.606e-03	1.0000	18.0	2.76%	2262.4	4.86%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-2.491e-03	1.0000	19.0	2.91%	2361.6	5.08%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-1.564e-03	1.0000	34.0	5.21%	3773.6	8.11%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	0.000e+00	1.0000	0.0	0.00%	16.8	0.04%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	0.000e+00	1.0000	0.0	0.00%	17.5	0.04%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	10.7	0.02%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	0.000e+00	1.0000	0.0	0.00%	141.2	0.30%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	7.8	0.02%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	26.6	0.06%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	0.000e+00	1.0000	0.0	0.00%	43.7	0.09%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	3.4	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	10.5	0.02%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	39.3	0.08%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	3.3	0.01%