Homer de novo Motif Results (hs_Foreskin_Foreskin_undef_DNMT3A_SRX873813_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 753
Total background sequences = 47726
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G A G T C A G T C G C T A T A G C G A C T C T G A T A C G T C A G C A T G C T A G A C T G G T A C T C A G A T G C A G T C 1e-72-1.668e+029.03%0.32%22.2bp (26.2bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.960)
More Information | Similar Motifs Found
motif file (matrix)
2 T G A C C T G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A G C A T 1e-55-1.287e+0215.41%2.37%26.0bp (31.2bp)BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer(0.976)
More Information | Similar Motifs Found
motif file (matrix)
3 C G A T A T C G C T A G A G C T A G T C C G T A C T A G G T A C C G T A A C G T G A C T A T G C A G T C G C A T C T A G T C G A 1e-14-3.255e+011.59%0.05%15.4bp (27.1bp)NRL/MA0842.1/Jaspar(0.643)
More Information | Similar Motifs Found
motif file (matrix)
4 G C T A C G T A G T C A A T G C G C A T G T C A C G T A G T A C C G T A G C T A C G T A C T A G A T C G A C T G A C G T A C T G 1e-13-3.150e+010.80%0.00%24.0bp (0.0bp)PB0119.1_Foxa2_2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
5 A T C G G T A C G T C A C G A T A G T C A T G C A T G C A T G C G T C A C T A G G C T A T A C G G T A C 1e-13-3.094e+011.99%0.12%27.4bp (28.0bp)MZF1/MA0056.1/Jaspar(0.683)
More Information | Similar Motifs Found
motif file (matrix)
6 A C T G A T C G G T A C C G T A A C T G T C A G C G A T T G A C G T C A T C G A T G C A A T G C G T C A A T G C G T C A G C T A 1e-13-3.063e+012.79%0.30%23.8bp (24.4bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.560)
More Information | Similar Motifs Found
motif file (matrix)
7 A T C G C G T A C T G A C G T A T C G A C G T A G T C A G T A C G T A C C G T A A T C G A G T C C G T A A C T G C T G A G T C A 1e-13-2.993e+010.93%0.01%28.1bp (9.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.553)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T T A C G C T G A G C T A A T C G C G A T C T A G A T G C C G T A A C T G A G T C A C G T A C T G C T G A A T C G C G T A 1e-11-2.735e+010.80%0.00%17.9bp (8.8bp)SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer(0.681)
More Information | Similar Motifs Found
motif file (matrix)
9 * G A T C C G T A C T A G C T G A A C T G G A C T C A G T A C T G G T A C G A T C C G A T T C G A C G T A A T C G G C T A C T A G 1e-11-2.662e+011.20%0.03%20.2bp (22.4bp)SD0002.1_at_AC_acceptor/Jaspar(0.544)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C C G A T A G T C C G T A A G T C A C G T A G C T C G T A C G T A G T C A C G T A C T G A A C T G 1e-11-2.555e+010.66%0.00%23.8bp (0.0bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.607)
More Information | Similar Motifs Found
motif file (matrix)
11 * A T G C A G T C A C G T A G C T T G A C A T G C G T C A A C T G A T C G C T G A C T G A G T A C G A T C A G C T A C G T G T C A 1e-11-2.555e+010.66%0.00%22.4bp (21.9bp)Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer(0.699)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A C A T G A C T G C G T A A T C G C T G A C G T A A C G T T A G C G C T A C T A G A G T C A G C T T A C G G A C T C G A T 1e-11-2.555e+010.66%0.00%15.6bp (6.7bp)NFKB1/MA0105.4/Jaspar(0.570)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C A G T C A G C T A T C G A C G T A G T C C G A T A C G T G T C A A G C T A T G C G T C A A T C G A C G T A C T G C G T A 1e-11-2.555e+010.66%0.00%23.6bp (18.7bp)MEIS3/MA0775.1/Jaspar(0.551)
More Information | Similar Motifs Found
motif file (matrix)
14 * C A G T C G T A C A T G A T G C A G C T T G C A C G A T A C T G C G A T A C G T A G T C A C G T C G T A A G T C A G T C A C G T 1e-11-2.555e+010.66%0.00%23.6bp (10.8bp)PB0090.1_Zbtb12_1/Jaspar(0.526)
More Information | Similar Motifs Found
motif file (matrix)
15 * G T A C A G T C G A C T A G C T C T G A C T A G C A T G T A G C G T C A T C G A 1e-10-2.430e+019.30%3.86%27.3bp (28.8bp)TFAP2C(var.2)/MA0814.1/Jaspar(0.738)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A T C G A C G T A G A C T C G T A C G T A T C G A A T G C A G T C C G T A A G T C C G T A C T G A 1e-10-2.406e+011.33%0.06%28.4bp (24.2bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.846)
More Information | Similar Motifs Found
motif file (matrix)
17 * C A G T C G T A C T G A A G T C A C G T A G T C C G A T A C G T C G T A C T G A A C G T C T A G A T G C 1e-10-2.406e+011.33%0.06%22.9bp (22.4bp)PB0172.1_Sox1_2/Jaspar(0.545)
More Information | Similar Motifs Found
motif file (matrix)
18 * T A C G A C G T T A G C G T C A C G T A G T A C G C T A A T G C C G T A C T A G A C G T A C T G T A C G T C A G C G A T A G C T 1e-10-2.406e+010.93%0.02%30.4bp (23.8bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.596)
More Information | Similar Motifs Found
motif file (matrix)
19 * T A C G C T A G C T A G C T G A C T G A T A C G A T G C G A C T C T G A C T A G A G T C C G T A A T C G 1e-10-2.397e+013.32%0.63%22.0bp (27.7bp)RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer(0.611)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A C G T A A C T G A C G T G T A C A G T C C G T A A G T C G T A C A C G T A C G T A C G T G T C A 1e-10-2.322e+010.80%0.01%19.4bp (15.9bp)PB0196.1_Zbtb7b_2/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
21 * A T C G A T C G G A T C C G T A C T A G A C T G G A T C C G T A C G T A C G T A A C T G G T A C T A C G G T C A T G A C A C G T 1e-10-2.314e+010.93%0.02%23.0bp (22.8bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.532)
More Information | Similar Motifs Found
motif file (matrix)
22 * G A C T G A T C T G C A C T A G A C T G G T C A A C G T A C G T G T C A A T C G C G A T T A C G C T G A C A T G T C G A C G A T 1e-9-2.266e+011.20%0.05%21.1bp (34.1bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C C G A T A C T G A T C G G T C A C T G A G A C T A C G T G T A C G T A C G C T A T A C G A C G T 1e-9-2.233e+012.12%0.25%27.2bp (26.7bp)TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer(0.744)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A C T G G T A C G T A C A C G T A C T G A C G T A C T G A C G T A T G C C G T A A T G C G T C A C G T A A T G C A G T C 1e-9-2.210e+010.66%0.00%26.2bp (0.0bp)FOS::JUN/MA0099.2/Jaspar(0.577)
More Information | Similar Motifs Found
motif file (matrix)
25 * C T G A A T C G C G T A T G A C C G T A T A G C C T G A T A C G C T A G A C G T A C G T A G T C A T G C A C G T A C T G A G T C 1e-9-2.210e+010.66%0.00%14.6bp (15.7bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.555)
More Information | Similar Motifs Found
motif file (matrix)
26 * A G T C C G T A C G T A T A C G A C G T T C G A C G T A A C G T A C T G C G T A C T A G T C G A G T C A C G T A A C T G C T G A 1e-9-2.189e+010.80%0.01%22.0bp (26.7bp)PH0028.1_En1/Jaspar(0.612)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G T A A C T G A C T G A T C G C G T A G T A C C G T A A C G T A G T C A C G T A T C G A G T C A G T C 1e-9-2.081e+010.80%0.01%24.0bp (24.6bp)PB0193.1_Tcfe2a_2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C T G A G T C C G A T A C T G 1e-8-1.979e+010.53%0.00%19.9bp (0.0bp)PB0016.1_Foxj1_1/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
29 * A G T C C G T A A C T G A G T C C T A G A C G T A C G T A C T G C G T A A T C G A C G T C G T A C G T A 1e-8-1.979e+010.53%0.00%21.0bp (0.9bp)FOS::JUN/MA0099.2/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A T C G C G A T A C T G C T G A C G A T A C T G A G T C C G T A C G A T A C T G C G A T A C G T 1e-8-1.979e+010.53%0.00%18.2bp (0.0bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.603)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A G C A T A G T C C G T A C G T A A C T G A G T C A C G T A G C T A T G C C A G T A C G T A G T C C G T A A C G T A C T G 1e-8-1.979e+010.53%0.00%19.5bp (0.0bp)Foxj2/MA0614.1/Jaspar(0.560)
More Information | Similar Motifs Found
motif file (matrix)
32 * G C T A C T G A A C T G T A C G C G T A T G C A C A T G A C G T C G A T A C T G 1e-8-1.924e+012.52%0.46%29.9bp (28.5bp)ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer(0.782)
More Information | Similar Motifs Found
motif file (matrix)
33 * A T G C A G T C A C G T A C T G A C T G A T G C G T C A A T G C A G C T C G T A C G T A C T G A A C T G 1e-8-1.866e+010.66%0.01%15.3bp (19.0bp)PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer(0.615)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G T C C G T A T A G C G A C T G T A C T G A C C G T A A T C G G C A T T C G A A G T C G T C A G T C A C T G A A G T C G T C A 1e-7-1.630e+011.06%0.07%23.5bp (25.8bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.645)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G C T G A G T A C C G T A A C T G A C T G G A C T A T G C C G T A A G T C C G T A A C T G A T C G 1e-6-1.473e+012.39%0.55%25.9bp (32.2bp)POL009.1_DCE_S_II/Jaspar(0.600)
More Information | Similar Motifs Found
motif file (matrix)
36 * A G T C A C T G C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T 1e-6-1.425e+010.40%0.00%17.1bp (0.0bp)PB0169.1_Sox15_2/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C G T A G T C T G C A A C T G A C G T A C G T A G T C A G T C A G T C G T A C A G T C A C T G A C G T A G T C C G A T A G T C 1e-6-1.425e+010.40%0.00%21.2bp (0.0bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.605)
More Information | Similar Motifs Found
motif file (matrix)
38 * C G T A C T A G A T C G A C G T C G T A A C G T A C G T C G T A C G T A A C G T C G T A A T C G A G T C 1e-5-1.218e+010.40%0.01%21.5bp (21.6bp)MEF2B/MA0660.1/Jaspar(0.728)
More Information | Similar Motifs Found
motif file (matrix)
39 * A G T C A C T G A C G T A C T G C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A G T C 1e-5-1.218e+010.40%0.00%30.7bp (16.8bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.590)
More Information | Similar Motifs Found
motif file (matrix)