Homer de novo Motif Results (hs_Embryonic_HUES64_normal_NR5A2_SRX702034_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 916
Total background sequences = 45065
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G C T C G A T G T C A A C T G A C T G A T C G T C G A G A C T G A T C C T A G 1e-108-2.487e+0214.30%0.92%25.4bp (28.0bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.710)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C 1e-93-2.160e+0223.25%4.11%20.9bp (36.8bp)MNT/MA0825.1/Jaspar(0.968)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G A C T G A T C G C G T A T A C G A T C G A C T G A G C T A G T C C A G T T C A G T A C G C T G A C T G A C G T A A C T G 1e-20-4.791e+010.98%0.00%13.0bp (0.0bp)KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer(0.568)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G A T G C A G T C T G A C A G T C A G T C C G A T A T C G A T G C A C G T A T C G C A T G G A C T 1e-18-4.178e+012.73%0.23%21.6bp (28.2bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.866)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G A G C T A C T G C G T A A G T C C G T A T G C A A G C T A G T C A G T C A G T C A G C T C T A G T C A G T A G C C A G T 1e-15-3.628e+010.87%0.01%21.4bp (10.2bp)Pax2/MA0067.1/Jaspar(0.611)
More Information | Similar Motifs Found
motif file (matrix)
6 T G C A T A C G T A G C C T A G T G A C C T G A G A C T A C T G A G T C C A T G A T G C T A G C T G C A 1e-15-3.613e+0110.92%4.39%25.4bp (36.8bp)NRF1/MA0506.1/Jaspar(0.866)
More Information | Similar Motifs Found
motif file (matrix)
7 A C G T G A C T A G C T A G T C G A T C A T C G G A T C A G T C A C G T A C G T A G T C A G T C C G T A A C T G G C A T A G T C 1e-14-3.349e+010.98%0.01%26.0bp (15.7bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.594)
More Information | Similar Motifs Found
motif file (matrix)
8 G T C A A G T C A C T G T G C A G T C A G T C A A C T G A C G T A C G T A G T C A G T C C T A G A T C G 1e-14-3.305e+010.87%0.01%23.0bp (25.1bp)Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer(0.730)
More Information | Similar Motifs Found
motif file (matrix)
9 G A T C G T C A A G T C A C G T A G C T A T G C A G T C A C T G A C T G G T A C G T A C A T G C A G T C A G T C C A T G A T C G 1e-13-3.187e+010.98%0.01%23.4bp (17.9bp)Gabpa/MA0062.2/Jaspar(0.733)
More Information | Similar Motifs Found
motif file (matrix)
10 A G T C A G C T A G T C C G A T A C T G A G T C C G T A A C T G A G T C A C T G A G T C G T A C A C G T 1e-13-2.998e+010.66%0.00%19.2bp (17.0bp)PB0091.1_Zbtb3_1/Jaspar(0.576)
More Information | Similar Motifs Found
motif file (matrix)
11 G A C T A C T G C T A G T G A C A C T G A T C G A T C G C G T A C G T A A C T G C T G A A C T G A G T C T C G A C T G A A C T G 1e-12-2.817e+010.76%0.01%30.5bp (17.5bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.636)
More Information | Similar Motifs Found
motif file (matrix)
12 * T C A G A T C G G A T C A T C G C T A G T A C G T G C A C T G A G C T A A C G T 1e-11-2.727e+012.40%0.33%25.0bp (33.0bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.836)
More Information | Similar Motifs Found
motif file (matrix)
13 * C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C 1e-11-2.584e+010.66%0.01%27.6bp (9.9bp)SP1/MA0079.3/Jaspar(0.677)
More Information | Similar Motifs Found
motif file (matrix)
14 * C T A G A C T G A C G T A G T C A C G T A G T C A C G T A G C T C G A T C G A T 1e-11-2.544e+011.31%0.07%24.8bp (28.3bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.639)
More Information | Similar Motifs Found
motif file (matrix)
15 * T C A G T A G C A G T C G C T A C T G A C G A T C T A G T A C G T C A G T A C G 1e-10-2.465e+014.69%1.41%28.0bp (29.2bp)NFY(CCAAT)/Promoter/Homer(0.852)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C T G A C T G A C G T A C G T C G A T A T C G C G T A C T A G A G C T A G T C C G T A A G T C 1e-10-2.429e+010.55%0.00%25.4bp (0.0bp)FOS::JUN/MA0099.2/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C G T A G T C A G C T A C G T A C G T A G T C A G T C A C G T A G C T A C T G A T G C C G T A A C T G 1e-10-2.429e+010.55%0.00%28.9bp (0.0bp)SA0002.1_at_AC_acceptor/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T G A A C T G A G T C A C T G A G T C A C T G C G T A A C T G A C T G A G T C A C T G A C T G A G T C 1e-10-2.429e+010.55%0.00%24.7bp (0.0bp)TFAP2A/MA0003.3/Jaspar(0.595)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A A C G T A C T G A C G T A C T G A G T C A T G C A G T C C T G A C T A G G C T A A C G T T C G A A C T G A C G T 1e-10-2.429e+010.55%0.00%17.1bp (0.0bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.653)
More Information | Similar Motifs Found
motif file (matrix)
20 * C T G A A T G C A G T C C T A G A C T G C G T A C T G A T G C A A G T C A C T G A C T G C G T A C T A G 1e-9-2.146e+011.31%0.11%30.9bp (26.7bp)FLI1/MA0475.2/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A T G C A G C T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G A G T C 1e-9-2.084e+010.55%0.01%22.2bp (21.1bp)PB0026.1_Gm397_1/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G A T A T G C A C T G C G T A C T G A A G T C A G T C C G T A C G T A G A C T 1e-8-2.039e+010.66%0.01%31.9bp (30.4bp)NFYB/MA0502.1/Jaspar(0.700)
More Information | Similar Motifs Found
motif file (matrix)
23 * T A G C A T C G A G T C G T C A A C G T C A G T T A G C A C T G A G T C A T G C A C T G A G T C G T A C A C G T A G C T A G T C 1e-8-1.899e+010.87%0.04%19.5bp (27.0bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T C G T A A G C T G T C A A C G T G T C A C G A T T C G A C A G T G A T C A C T G A T G C C T A G 1e-8-1.883e+010.55%0.01%25.1bp (21.4bp)PB0163.1_Six6_2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
25 * G T C A A G T C C G A T A G T C C A T G T C G A A G T C A G T C A G T C A C G T A C T G C G T A A G T C A T G C A C G T A G C T 1e-8-1.878e+010.44%0.00%17.4bp (0.0bp)RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer(0.677)
More Information | Similar Motifs Found
motif file (matrix)
26 * A T G C G A C T A C T G A G T C A G T C C T A G A C T G A C T G A C T G C G T A A C T G A G T C C A T G A G C T G T A C A C T G 1e-8-1.878e+010.44%0.00%20.5bp (0.0bp)POL013.1_MED-1/Jaspar(0.592)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G T A A C T G G T C A A G T C A C G T A G T C G T A C A C G T A G T C A C T G A C G T A G T C G T A C 1e-7-1.631e+010.55%0.01%24.8bp (10.1bp)PB0203.1_Zfp691_2/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
28 * C G T A A C T G A C T G A C G T A G T C A C G T A C T G A G T C A C T G C G T A 1e-6-1.602e+010.44%0.01%30.4bp (8.2bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.625)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G 1e-5-1.292e+010.55%0.02%27.2bp (17.5bp)NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer(0.609)
More Information | Similar Motifs Found
motif file (matrix)