Information for 10-GAGCCCCACCTCCGGC (Motif 13)

C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
Reverse Opposite:
A T C G A G T C A G T C A C T G T C A G C G T A A C T G A C T G A G C T A C T G A C T G A T C G A C T G T A G C A C G T A G T C
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 27.6bp
Average Position of motif in Background77.0 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC
--GCCCCGCCCCC---
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC-
--GCCCCGCCCCCTCCC
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGCCCCACCTCCGGC
NAGCCCCGCCCCCN--
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC
--GCCCCGCCCC----
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC
-GGCCCCGCCCCC---
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCCCACCTCCGGC
NNGGCGACACCTCNNN-
 A C G T C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGCCCCACCTCCGGC-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC
--CCCCCGCCCCCGCC
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC-
------CGCCTCAGGCA
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCCCCACCTCCGGC
NRGCCCCRCCCHBNN-
 C T A G C G T A A T C G A G T C A T G C A G T C A G T C C T G A A G T C A G T C A C G T A G T C G T A C T C A G A C T G A T G C
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T