Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-76 | -1.761e+02 | 0.0000 | 89.0 | 9.72% | 272.0 | 0.57% | motif file (matrix) |
svg |
2 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-55 | -1.283e+02 | 0.0000 | 39.0 | 4.26% | 31.5 | 0.07% | motif file (matrix) |
svg |
3 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-46 | -1.069e+02 | 0.0000 | 90.0 | 9.83% | 650.8 | 1.36% | motif file (matrix) |
svg |
4 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-29 | -6.871e+01 | 0.0000 | 245.0 | 26.75% | 6034.8 | 12.62% | motif file (matrix) |
svg |
5 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-27 | -6.231e+01 | 0.0000 | 261.0 | 28.49% | 6929.6 | 14.49% | motif file (matrix) |
svg |
6 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-22 | -5.109e+01 | 0.0000 | 168.0 | 18.34% | 3900.5 | 8.16% | motif file (matrix) |
svg |
7 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-10 | -2.406e+01 | 0.0000 | 137.0 | 14.96% | 3999.0 | 8.36% | motif file (matrix) |
svg |
8 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-10 | -2.374e+01 | 0.0000 | 131.0 | 14.30% | 3779.5 | 7.91% | motif file (matrix) |
svg |
9 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-9 | -2.300e+01 | 0.0000 | 243.0 | 26.53% | 8600.1 | 17.99% | motif file (matrix) |
svg |
10 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-8 | -1.973e+01 | 0.0000 | 161.0 | 17.58% | 5281.9 | 11.05% | motif file (matrix) |
svg |
11 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-7 | -1.796e+01 | 0.0000 | 105.0 | 11.46% | 3096.2 | 6.48% | motif file (matrix) |
svg |
12 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-7 | -1.616e+01 | 0.0000 | 119.0 | 12.99% | 3786.4 | 7.92% | motif file (matrix) |
svg |
13 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-6 | -1.534e+01 | 0.0000 | 102.0 | 11.14% | 3146.4 | 6.58% | motif file (matrix) |
svg |
14 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.527e+01 | 0.0000 | 11.0 | 1.20% | 72.8 | 0.15% | motif file (matrix) |
svg |
15 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-6 | -1.469e+01 | 0.0000 | 207.0 | 22.60% | 7778.4 | 16.27% | motif file (matrix) |
svg |
16 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-6 | -1.396e+01 | 0.0000 | 74.0 | 8.08% | 2120.1 | 4.43% | motif file (matrix) |
svg |
17 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-5 | -1.353e+01 | 0.0000 | 76.0 | 8.30% | 2224.8 | 4.65% | motif file (matrix) |
svg |
18 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-5 | -1.342e+01 | 0.0000 | 26.0 | 2.84% | 456.5 | 0.95% | motif file (matrix) |
svg |
19 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-5 | -1.316e+01 | 0.0000 | 352.0 | 38.43% | 14907.4 | 31.18% | motif file (matrix) |
svg |
20 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-5 | -1.235e+01 | 0.0001 | 177.0 | 19.32% | 6667.3 | 13.95% | motif file (matrix) |
svg |
21 |
| RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer | 1e-5 | -1.201e+01 | 0.0001 | 17.0 | 1.86% | 239.8 | 0.50% | motif file (matrix) |
svg |
22 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-5 | -1.180e+01 | 0.0001 | 106.0 | 11.57% | 3583.1 | 7.49% | motif file (matrix) |
svg |
23 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-4 | -1.115e+01 | 0.0002 | 143.0 | 15.61% | 5264.7 | 11.01% | motif file (matrix) |
svg |
24 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-4 | -1.093e+01 | 0.0003 | 72.0 | 7.86% | 2235.7 | 4.68% | motif file (matrix) |
svg |
25 |
| Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer | 1e-4 | -1.048e+01 | 0.0004 | 17.0 | 1.86% | 270.6 | 0.57% | motif file (matrix) |
svg |
26 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-4 | -1.025e+01 | 0.0005 | 86.0 | 9.39% | 2866.4 | 6.00% | motif file (matrix) |
svg |
27 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-4 | -9.636e+00 | 0.0009 | 117.0 | 12.77% | 4266.4 | 8.92% | motif file (matrix) |
svg |
28 |
| X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -9.471e+00 | 0.0010 | 14.0 | 1.53% | 210.6 | 0.44% | motif file (matrix) |
svg |
29 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.607e+00 | 0.0023 | 98.0 | 10.70% | 3534.8 | 7.39% | motif file (matrix) |
svg |
30 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.598e+00 | 0.0023 | 43.0 | 4.69% | 1236.3 | 2.59% | motif file (matrix) |
svg |
31 |
| Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer | 1e-3 | -8.318e+00 | 0.0029 | 32.0 | 3.49% | 836.8 | 1.75% | motif file (matrix) |
svg |
32 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.224e+00 | 0.0030 | 55.0 | 6.00% | 1738.8 | 3.64% | motif file (matrix) |
svg |
33 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.717e+00 | 0.0049 | 46.0 | 5.02% | 1410.8 | 2.95% | motif file (matrix) |
svg |
34 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.695e+00 | 0.0049 | 33.0 | 3.60% | 905.1 | 1.89% | motif file (matrix) |
svg |
35 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-3 | -7.457e+00 | 0.0060 | 34.0 | 3.71% | 956.5 | 2.00% | motif file (matrix) |
svg |
36 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.330e+00 | 0.0066 | 48.0 | 5.24% | 1518.5 | 3.18% | motif file (matrix) |
svg |
37 |
| MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.309e+00 | 0.0066 | 12.0 | 1.31% | 202.4 | 0.42% | motif file (matrix) |
svg |
38 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-3 | -7.232e+00 | 0.0069 | 86.0 | 9.39% | 3149.8 | 6.59% | motif file (matrix) |
svg |
39 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.693e+00 | 0.0116 | 72.0 | 7.86% | 2590.9 | 5.42% | motif file (matrix) |
svg |
40 |
| Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-2 | -6.509e+00 | 0.0136 | 18.0 | 1.97% | 417.9 | 0.87% | motif file (matrix) |
svg |
41 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -6.471e+00 | 0.0137 | 30.0 | 3.28% | 859.2 | 1.80% | motif file (matrix) |
svg |
42 |
| ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.099e+00 | 0.0195 | 4.0 | 0.44% | 28.3 | 0.06% | motif file (matrix) |
svg |
43 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-2 | -6.099e+00 | 0.0195 | 64.0 | 6.99% | 2301.0 | 4.81% | motif file (matrix) |
svg |
44 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -6.062e+00 | 0.0195 | 15.0 | 1.64% | 332.6 | 0.70% | motif file (matrix) |
svg |
45 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -5.890e+00 | 0.0224 | 46.0 | 5.02% | 1548.6 | 3.24% | motif file (matrix) |
svg |
46 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.731e+00 | 0.0257 | 35.0 | 3.82% | 1105.6 | 2.31% | motif file (matrix) |
svg |
47 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.712e+00 | 0.0257 | 14.0 | 1.53% | 311.4 | 0.65% | motif file (matrix) |
svg |
48 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -5.669e+00 | 0.0262 | 69.0 | 7.53% | 2567.9 | 5.37% | motif file (matrix) |
svg |
49 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-2 | -5.516e+00 | 0.0299 | 61.0 | 6.66% | 2230.1 | 4.66% | motif file (matrix) |
svg |
50 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-2 | -5.389e+00 | 0.0332 | 39.0 | 4.26% | 1296.3 | 2.71% | motif file (matrix) |
svg |
51 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.255e+00 | 0.0373 | 22.0 | 2.40% | 621.8 | 1.30% | motif file (matrix) |
svg |
52 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-2 | -5.217e+00 | 0.0380 | 50.0 | 5.46% | 1781.0 | 3.73% | motif file (matrix) |
svg |
53 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-2 | -5.075e+00 | 0.0429 | 53.0 | 5.79% | 1925.2 | 4.03% | motif file (matrix) |
svg |
54 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -5.051e+00 | 0.0432 | 41.0 | 4.48% | 1409.3 | 2.95% | motif file (matrix) |
svg |
55 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-2 | -5.010e+00 | 0.0442 | 24.0 | 2.62% | 713.2 | 1.49% | motif file (matrix) |
svg |
56 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -5.009e+00 | 0.0442 | 22.0 | 2.40% | 635.4 | 1.33% | motif file (matrix) |
svg |
57 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -4.976e+00 | 0.0442 | 20.0 | 2.18% | 560.9 | 1.17% | motif file (matrix) |
svg |
58 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -4.729e+00 | 0.0554 | 36.0 | 3.93% | 1225.9 | 2.56% | motif file (matrix) |
svg |
59 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -4.669e+00 | 0.0579 | 48.0 | 5.24% | 1748.8 | 3.66% | motif file (matrix) |
svg |